Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod07g2093 | ATGGAAGTTGCAATGGAGGAGAAACCATTCCCTGCATGGTCATGGTCTGTTGAGCAGTGCTTGAAAGAGTATGGTGTGAAACTGGACAAGGGTCTCAGCAGTTATGAGGTTCAGAAGCAGCGCGAGAAGTATGGGTGGAATGAGTTAACAAAAGAGAAGGGGAAGCCCTTGTGGCAACTAGTATTAGAACAATTTGATGACATGCTGGTGAAGATTCTTTTGGTTGCTGCCTTCATATCATTTATCTTGGCTTACTTTCATGGAAGTGAATCTGAGGAGTCTGGATTTGAAGCTTATGTGGAGCCACTTGTGATAATTTTGATTTTAGTCCTTAATGCCATGGTTGGAGTTTGGCAAGAGAATAATGCTGAAAAGGCTCTTGAAGCTCTTAAGGAGTTGCAATGTGAATCTGGGAAAGTGCTAAGGGATGGGAATTTTGTGCCTGATTTGCCTGCAAGAGAGCTTGTTCCTGGGGACATTGTGGAGCTGCATGTTGGAGACAAAGTCCCTGCGGACATGAGAGTTGCGGCTCTGAAGACCTCAACGTTGCGAGTCGAGCAAAGCTCATTAACCGGAGAGGCAATGCCTGTTCTCAAAGGAACCAGTCCTATTTTCTTGGAAGATTGTGAGTTGCAGGCCAAAGAAAACATGGTCTTTGCAGGAACCACTGTTGTCAATGGGAGCTGTCTTTGTATTGTTATTACCACAGGAATGAACACCGAAATCGGAAAGATACAGAAGCAGATACATGAGGCTTCTATGGAGGAAAGTGACACTCCTTTGAAGAAGAAGCTGGATGAATTTGGTGGCAGGCTCACCACTGCCATTGGCTTAGTTTGCCTCATTGTTTGGATGATAAACTACAAGAACTTCCTCTCTTGGGATGTTGTTGATGGATGGCCCTCAAACATCAAGTTTTCTGTTCAGAAGTGCACCTACTATTTCAAAATTGCTGTTGCACTTGCAGTGGCTGCAATCCCAGAAGGTCTTCCTGCTGTTATCACAACTTGTTTAGCCCTTGGCACTAGGAAAATGGCACAAAAGAATGCAATTGTGAGAAAGCTTCCTAGTGTAGAAACTCTGGGGTGTACAACTGTGATCTGCTCAGATAAAACCGGCACTCTTACAACAAATCAAATGTCTGTGACCGAGTTCTTTACTCTGGGAGGGAAAACCACCGCTTCTCGAGTCATTAGCGTTGAAGGAACAACCTATGATCCCAAGGATGGGGGCATTGTTGATTGGACTTGTTATAACATGGATGCCAACTTGCTAGCCATGGCTGAAATATGTGCAGTTTGCAATGATGCTGGGATTTATTTTGATGGGCGCCTTTTCCGAGCTACTGGTTTGCCTACTGAAGCGGCTCTCAAAGTCTTGGTTGAAAAGATGACAAGGAACAAGATTGATGATGCACAAGTTGCTGCAAACAACATGAATGAATACAACACTGTGATGTTAGGCTGCTGTGAGTGGTGGAATAGAAGATCCAAGAGGGTGGCTACATTGGAGTTTGATCGCGTTCGAAAGTCAATGAGTGTCATTGTTCGTGAACCAAATGGCCTAAATCGGCTTCTTGTCAAGAGAGAAGCTCACATGTGCAACTTGCCTGATGGTTCCCTGGTTCCAATAGATGAGCAATGTAGGGAACTACTTCTACAAAGACTCATGGAGATGAGTTCAAAGGGATTGCGTTGCTTGGGTTTGGCATATAAGGATGACTTGGGAGAGTTTTCAGACTATTATGCAGATAGTCATCCTGCCCACCACAAATTGCTTGATCCAGGATGCTACTCTTCCATTGAAAGTGATCTAGTTTTTGTTGGTGTTGTTGGTCTAAGAGACCCTCCTCGTGAGGAAGTTCATAAAGCAATTGAGGATTGTAGGGAAGCTGGTATTAGAGTTATGGTAATAACTGGAGACAACAAATCAACAGCAGAGGCTATTTGTAGGGAAATAAAGTTGTTCTCCAAAGATGAGGATCTTGCAGGACAAAGCCTAACAGGTAAACAATTCATGTCTCTTCCTCCTTCGGAACAAGTTAGGATGCTGCTGAGACCTGGAGGCAAGGTCTTTTCTCGAGCCGAGCCGAGACACAAGCAAGAAATCGTGAGATTACTGAAGGAAATGGGGGAGATTGTTGCAATGACTGGAGATGGAGTGAATGATGCACCTGCACTTAAGCTTGCTGACATAGGGATTGCTATGGGCATAACTGGAACAGAGGTTGCAAAAGAAGCCTCAGATATGGTGCTTGCAGATGACAACTTTAGCACAATTGTTTCAGCTGTTGCCGAAGGCCGCTCTATTTACAATAACATGAAAGCATTCATCAGGTACATGATATCATCAAATGTTGGAGAAGTGATATCTATATTCTTGACTGCTGCACTGGGGATCCCAGAATGCATGATACCAGTGCAACTCCTGTGGGTGAACTTGGTTACTGATGGTCCACCTGCAACAGCTCTTGGATTCAACCCTGCTGATGTTGATATCATGCGGAAGCCGCCTAGGAGAAGTGATGATCCACTCATAAGTTCTTGGGTTCTTTTTCGTTATCTAGTAATTGGTTCCTATGTGGGGATTGCAACAGTTGGCATCTTTGTCTTGTGGTACACACAAGCTTCTCTTCTAGGCATCAATCTTGTGACTGATGGCCACACAATCATAGAACTGTCGCAGCTTCTCAACTGGGGGGAGTGTCATTCATGGTCTAATTTCACTGCAGCTCCATTCGCTGTTGGTGGGGGTAGGTTGATAACATTTTCAGATCCTTGTGACTATTTTTCGGTTGGCAAAGTGAAGGCCATGACACTGTCCCTTTCTGTCTTGGTGGCAATTGAGATGTTCAATTCTTTGAATGCACTCTCAGAAGAGAATAGCTTGAGCAAGATTCCACCTTGGAGGAACCCTTTTCTTTTGGTAGCCATGTCAATATCATTTGGACTCCATTGCCTCATACTCTACACCCCATTCCTAGCAAATGTGTTTGGTGTTGTTCCACTAAGTTTGAATGAGTGGTTTATGGTCATTCTAATATCAGCACCTGTTATTCTCATTGATGAGATTCTAAAATTAGTGGCAAGGAGTCAAAGAAGGATGACAAAGGAGAAAGCAGCATGA | 3126 | 0.4402 | MEVAMEEKPFPAWSWSVEQCLKEYGVKLDKGLSSYEVQKQREKYGWNELTKEKGKPLWQLVLEQFDDMLVKILLVAAFISFILAYFHGSESEESGFEAYVEPLVIILILVLNAMVGVWQENNAEKALEALKELQCESGKVLRDGNFVPDLPARELVPGDIVELHVGDKVPADMRVAALKTSTLRVEQSSLTGEAMPVLKGTSPIFLEDCELQAKENMVFAGTTVVNGSCLCIVITTGMNTEIGKIQKQIHEASMEESDTPLKKKLDEFGGRLTTAIGLVCLIVWMINYKNFLSWDVVDGWPSNIKFSVQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGGKTTASRVISVEGTTYDPKDGGIVDWTCYNMDANLLAMAEICAVCNDAGIYFDGRLFRATGLPTEAALKVLVEKMTRNKIDDAQVAANNMNEYNTVMLGCCEWWNRRSKRVATLEFDRVRKSMSVIVREPNGLNRLLVKREAHMCNLPDGSLVPIDEQCRELLLQRLMEMSSKGLRCLGLAYKDDLGEFSDYYADSHPAHHKLLDPGCYSSIESDLVFVGVVGLRDPPREEVHKAIEDCREAGIRVMVITGDNKSTAEAICREIKLFSKDEDLAGQSLTGKQFMSLPPSEQVRMLLRPGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMRKPPRRSDDPLISSWVLFRYLVIGSYVGIATVGIFVLWYTQASLLGINLVTDGHTIIELSQLLNWGECHSWSNFTAAPFAVGGGRLITFSDPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEENSLSKIPPWRNPFLLVAMSISFGLHCLILYTPFLANVFGVVPLSLNEWFMVILISAPVILIDEILKLVARSQRRMTKEKAA* | 1042 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod07g2093 | 1041 | Pfam | E1-E2 ATPase | 134 | 348 | - | - | |
| Dod07g2093 | 1041 | SFLD | p-type atpase | 349 | 769 | IPR044492 | - | |
| Dod07g2093 | 1041 | Pfam | haloacid dehalogenase-like hydrolase | 365 | 731 | - | - | |
| Dod07g2093 | 1041 | SUPERFAMILY | Calcium ATPase, transduction domain A | 140 | 248 | IPR008250 | - | |
| Dod07g2093 | 1041 | Gene3D | - | 378 | 616 | IPR023299 | GO:0000166 | |
| Dod07g2093 | 1041 | SUPERFAMILY | HAD-like | 366 | 821 | IPR036412 | - | |
| Dod07g2093 | 1041 | Gene3D | - | 365 | 762 | IPR023214 | - | |
| Dod07g2093 | 1041 | Gene3D | - | 63 | 1030 | - | - | |
| Dod07g2093 | 1041 | SFLD | Haloacid Dehalogenase | 349 | 769 | - | - | |
| Dod07g2093 | 1041 | PANTHER | RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED | 8 | 1037 | - | - | |
| Dod07g2093 | 1041 | SMART | Cation_ATPase_N_a_2 | 11 | 85 | IPR004014 | - | |
| Dod07g2093 | 1041 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 691 | 802 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Dod07g2093 | 1041 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 306 | 393 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Dod07g2093 | 1041 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 370 | 376 | IPR018303 | - | |
| Dod07g2093 | 1041 | Pfam | Cation transporter/ATPase, N-terminus | 13 | 80 | IPR004014 | - | |
| Dod07g2093 | 1041 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 375 | 613 | IPR023299 | GO:0000166 | |
| Dod07g2093 | 1041 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 11 | 1032 | IPR023298 | - | |
| Dod07g2093 | 1041 | Pfam | Cation transporting ATPase, C-terminus | 802 | 1028 | IPR006068 | - | |
| Dod07g2093 | 1041 | Gene3D | - | 30 | 252 | - | - | |
| Dod07g2093 | 1041 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 8 | 1037 | - | - | |
| Dod07g2093 | 1041 | PRINTS | P-type cation-transporting ATPase superfamily signature | 368 | 382 | - | - | |
| Dod07g2093 | 1041 | PRINTS | P-type cation-transporting ATPase superfamily signature | 609 | 620 | - | - | |
| Dod07g2093 | 1041 | PRINTS | P-type cation-transporting ATPase superfamily signature | 741 | 753 | - | - | |
| Dod07g2093 | 1041 | PRINTS | P-type cation-transporting ATPase superfamily signature | 631 | 641 | - | - | |
| Dod07g2093 | 1041 | PRINTS | P-type cation-transporting ATPase superfamily signature | 186 | 200 | - | - | |
| Dod07g2093 | 1041 | PRINTS | P-type cation-transporting ATPase superfamily signature | 717 | 736 | - | - | |
| Dod07g2093 | 1041 | PRINTS | Sodium/potassium-transporting ATPase signature | 361 | 382 | - | - | |
| Dod07g2093 | 1041 | PRINTS | Sodium/potassium-transporting ATPase signature | 970 | 994 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod07g2093 | Dod-Chr7 | 52066179 | 52071028 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod07g2093 | 6 | 1039 | Primary Pumps ATPases(2) | AT4G00900 | 77.767 | 0.0 | 1671 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod07g2093 | K01537 | - | gmx:100792952 | 1848.94 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dod07g2093 | 07 | 52066179 | 52071028 | Dod07g2093 | 07 | 52066179 | 52071028 | ECH |