Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2075 ATGAAGATTGACGTGGGTTTTGGAGGAGGTGGTGTTGGGTTGTGGAATGGTGATGAAGAAGAAAAAGCCATGGTGGTGGAGGTTCTTGGCACAAGCGCTTTTGATTACTTGGTTGCAAACTCTTTCACCAATGAGAGCATGTTAATGGCCATAGGCGGTGGTGGTGAAAATCTTCAGAAATTGCTATCTGATCTCGTGGAACGCCCCAACAAGTCCAATTTCAGCTGGAACTATGCAATCTTCTGGCAGATTTCACAGTCCAAGCACAAAGATTGTGTTCTTGGTTGGGGTGATGGGTGTTGTAGGGAGCCAATGGAAGGTGAAGAACTTGGAGGGATTTTGAGGCTTGGATTTGATGATGATGACGAGGTTCAACAAAGGATGAGGAAGAGGGTGTTGCAGAAGCTGCACAAAGTTTTTGGGGGGTCAGATGATGAGGATAACTATGCTTTTGGTTTAGACCGTGTTACTGACACTGAGATGTTCTTCCTTGCTTCGATGTACTTCTCTTTCCCCAAGGGGCATGGTGGACCTGGTAAGTGCTTTGCATCAGGTAAGCACTTGTGGCTTTGTGGTGATGCTTTGAAATCTGGTTCTGATGATTACTTTGTGAGGTCCTTCTTGGCCAGATCAGCTGGGATTAGGACTGTTGTTTTGGTGCCTACTGATTTGGGTGTTGTGGAGTTGGGTTCTGTGAGGATGGTTGGGGAGAGCCTTGAGTTGTTGCATGCTGTGAAATCTGTGTTTTCTGCTCAATCATCATTTCCTAATGCTAAGCCTGTTGTTGTGCCGTTGGGTGTGGTGGATGAAAATACTCAAAATAGAGATGAGAATGGCAATTTTTCTGGTTTGACCATTGGGGATAGTGATGGGAATAGAGTAGAGGGTGTTCCAAAGATTTTCGGAAAGGAATTGAATTGTGTGAATTCGGGTGGTAAGCATTTTAGGGAGAAACTTGCTGTTCGGAAAGTGGAAGAGAGGCCTTCAAATAGCATTAGATTTCCAAATGCTAGGAATGGTTTTCATAGTTCAAGTTGGGGAGTTAGTCAAGGTGTGAAGCAGGTTAGCCCTGCTGAAATTTATGCCCCAAGGTCTTCCAAAGTACCGCAGCTAGCCGATGGCACGAGAAGCAATTTCATGGTTAACAATTATCAATCGCAACAAGGGCAGGTGCCGGTGCAGATTGATTTCTCAGTAGCCGCATCAAGGCCTTGTGTGAGACCAATAGTTGGTGAATCTGAGCTATCTGATGTTGAGGCCTCATGCAAGGAAGAGAAACCGGGCGCAGCTGATGACAGGAGGCCTAGGAAGCGGGGCAGGAAGCCTGCTAACGGGAGGGAGGAACCCCTCAATCACGTCGAAGCAGAGAGGCAGAGGCGTGAGAAGCTGAACCAGCGTTTCTACGCGTTGCGCGCTGTTGTGCCAAACATCTCCAAGATGGATAAGGCATCTCTATTGGGAGATGCTATTGCTTACATCAATGAACTGCAGGCAAAACTCAAGGTTATGGAGTCTGAGAGGGAGAGATTCGGAAGCACTTCTAGTGATGGATCAGCATTAGAGGCCAACTCAAGAGCAGAAAATCATCAGAGTATTGCTTCTGATGTTGATGTTCAAGCTAACCAAGATGGGGTCATTGTAAAGGTGAGTTGCCCTGTTGATGTTCACCCTGCTTCAAGAATAATCCAAGCATTCAAAGATGCTGAAATCAGTATTGTAGAGTCCAAACTTGCTGCTGCAAATGATGCTGTTTTCCACACATTTGTGATCAAGCCCCAGGGACATGAGCAGCTGACGAAGGAGAAGTTGATTGCAGCATTTTCCCAAGAATCCAATTCCTTATTTCCATTGTCATTGTAG 1860 0.4602 MKIDVGFGGGGVGLWNGDEEEKAMVVEVLGTSAFDYLVANSFTNESMLMAIGGGGENLQKLLSDLVERPNKSNFSWNYAIFWQISQSKHKDCVLGWGDGCCREPMEGEELGGILRLGFDDDDEVQQRMRKRVLQKLHKVFGGSDDEDNYAFGLDRVTDTEMFFLASMYFSFPKGHGGPGKCFASGKHLWLCGDALKSGSDDYFVRSFLARSAGIRTVVLVPTDLGVVELGSVRMVGESLELLHAVKSVFSAQSSFPNAKPVVVPLGVVDENTQNRDENGNFSGLTIGDSDGNRVEGVPKIFGKELNCVNSGGKHFREKLAVRKVEERPSNSIRFPNARNGFHSSSWGVSQGVKQVSPAEIYAPRSSKVPQLADGTRSNFMVNNYQSQQGQVPVQIDFSVAASRPCVRPIVGESELSDVEASCKEEKPGAADDRRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMESERERFGSTSSDGSALEANSRAENHQSIASDVDVQANQDGVIVKVSCPVDVHPASRIIQAFKDAEISIVESKLAAANDAVFHTFVIKPQGHEQLTKEKLIAAFSQESNSLFPLSL* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2075 619 Pfam Helix-loop-helix DNA-binding domain 451 497 IPR011598 GO:0046983
Dod07g2075 619 PANTHER ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR 10 612 - -
Dod07g2075 619 MobiDBLite consensus disorder prediction 416 458 - -
Dod07g2075 619 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 58 249 IPR025610 -
Dod07g2075 619 MobiDBLite consensus disorder prediction 417 458 - -
Dod07g2075 619 PANTHER MYC 10 612 IPR045084 GO:0003700|GO:0006355
Dod07g2075 619 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 447 496 IPR011598 GO:0046983
Dod07g2075 619 SMART finulus 453 502 IPR011598 GO:0046983
Dod07g2075 619 CDD bHLH_AtAIB_like 444 516 - -
Dod07g2075 619 Gene3D - 440 512 IPR036638 GO:0046983
Dod07g2075 619 Coils Coil 493 513 - -
Dod07g2075 619 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 450 510 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2075 Dod-Chr7 51832823 51835596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2075 11 610 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 49.521 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod07g2075 bHLH-MYC_N 9.1e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2075 - - gmx:100807078 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2075 07 51832823 51835596 Dod07g2075 07 51832823 51835596 ECH
Dod01g3636 01 77693246 77696520 Dod07g2075 07 51832823 51835596 PCT