Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod07g2072 | ATGGAATCTGGTGATAGCACTGTATCATCATTGATCATGATGGATGATGACGATGATAGGCATCCCCATCAGTATTCTTCAAACACCACCAAGGTGCATAGCAGTGGTGGCCCCACAGCTACTAGTGTCCATGAGCTTCTTGAGTGCCCTGTCTGCACCAATTCAATGTACCCTCCAATCCATCAGTGCCACAATGGTCATACCCTTTGTTCAACTTGTAAGACAAGGGTACATAATCGGTGCCCGACATGTAGACAGGAACTTGGTGATATAAGGTGTTTGGCATTGGAGAAGATAGCAGAATCACTAGAATTGCCTTGCAGATATAACTCTCTTGGGTGTCTAGAGATATTTCCCTATTACGGCAAACTCAAACATGAGTCTATTTGTAACTTCAGACCTTACAACTGCCCCTATGCTGGCTCAGACTGTTCTGTTGTTGGGGATATTCCATACCTCGTTGCTCATTTAAGGGATGACCATAGGGTAGATATGCATTCCGGGTGCACCTTTAACCATCGCTATGTCAAATCTAATCCCATGGAAGTAGAAAATGCTACATGGATGCTGACAGTCTTCCACTGTTTCGGTCAGTACTTTTGTCTCCATTTTGAAGCCTTCCAGCTTGGTAAGGCTCCGGTTTACATGGCATTCCTCCGTTTCATGGGCGATGAAAGAGAGGCACGGAGCTATAGCTACAGCTTGGAGGTAGGAGGAAACGGGCGAAAACTAGTTTTTGAGGGCAGTCCAAGAAGCATTAGAGATAGCCACAAGAAAGTTAGGGACAGCCATGATGGCCTCATTGTATACAGAAACATGGCACTCTTCTTCTCAGGTGGAGATAGGAAAGAGTTGAAGCTAAGAGTAACAGGAAGGATATGGAAAGAACAGCAAAACCCTGAAGGTGGTGTGTGCATACCAAACCTGTGCAGCTAG | 936 | 0.4541 | MESGDSTVSSLIMMDDDDDRHPHQYSSNTTKVHSSGGPTATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKIAESLELPCRYNSLGCLEIFPYYGKLKHESICNFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHRVDMHSGCTFNHRYVKSNPMEVENATWMLTVFHCFGQYFCLHFEAFQLGKAPVYMAFLRFMGDEREARSYSYSLEVGGNGRKLVFEGSPRSIRDSHKKVRDSHDGLIVYRNMALFFSGGDRKELKLRVTGRIWKEQQNPEGGVCIPNLCS* | 312 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod07g2072 | 311 | PANTHER | UBIQUITIN LIGASE SINAT3 | 5 | 303 | - | - | |
Dod07g2072 | 311 | Pfam | Seven in absentia protein family | 91 | 290 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Dod07g2072 | 311 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Dod07g2072 | 311 | SUPERFAMILY | TRAF domain-like | 102 | 294 | - | - | |
Dod07g2072 | 311 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 8 | 101 | IPR013083 | - | |
Dod07g2072 | 311 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 164 | 290 | IPR008974 | GO:0005515 | |
Dod07g2072 | 311 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE SIAH | 5 | 303 | - | - | |
Dod07g2072 | 311 | ProSiteProfiles | Zinc finger RING-type profile. | 49 | 85 | IPR001841 | - | |
Dod07g2072 | 311 | ProSiteProfiles | Zinc finger SIAH-type profile. | 102 | 162 | IPR013010 | GO:0008270 | |
Dod07g2072 | 311 | SUPERFAMILY | RING/U-box | 39 | 88 | - | - | |
Dod07g2072 | 311 | CDD | Sina | 163 | 291 | - | - | |
Dod07g2072 | 311 | CDD | RING-HC_SIAHs | 47 | 85 | - | - | |
Dod07g2072 | 311 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 102 | 157 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod07g2072 | Dod-Chr7 | 51797724 | 51801616 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod07g2072 | 26 | 297 | C3H Transcription Factor Family | AT2G41980 | 76.103 | 1.80e-158 | 442 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod07g2072 | K04506 | - | gmx:100792687 | 599.356 |