Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2067 ATGCTTCGGCGCTCCGATGTGAAGTTAGGGTTTTACAGCAACATGATAGGTAATCGAACGATGAAAACTGAAATGCCGAACCTGAAACGGTGCAAGCTTGAAGAAGAAGAAGAAGAACATGATTCTGAGAGCTACGGTTGTTCTGTAAATCTGAAGAAGAGGAACAAGCGTAGTAAGGTTGATGCTGCTGAAGATTTCAGCAGCGGTTCTGGCTCTTGGTGCAGTGAAGGATCGTATTGGAATGGTGGTGGTGAGGTTCAGTCCAATTCCAATTCCGTGAAGTTGAATGGCAAAACGGCGCCACGTGGCGGCGGCAAAGGGCGGCGGTCGCCGCTGCCACCGCCGCTCCTGCGGTCCTTGCGAGGCCGCCTTCAGACTCTGCCATCGCGGTTCAGTGACTCTGTTTTCGATTCGTGGAAGAACCGCGCGATCAAAGCGGAAGAGGACACAGATTCCAGCTTTGAAGATGATAATGACAACAAGAGATTTATGGAAAAACAGGAGAAGAATAAGGATGATGATAATGATAAAAATACGGATAAGTATAACTATGGTTCTGAAGAAGTGAATGTGGAAGAGGAAAAGGATGGTTTCGTTAAGACTGAGAGTAACACTTCTGGGATTAGTTTTGAAGGTGCTGTTGGCCAGAAGGTGAACAACGGGAATGGTGGTGTGAGGAGGAAAGAGGTTTACAAGCCAGAGGATTTTGCTTTGGGTGATATAGTGTGGGCCAAGTGTGGGAAGAGGTACCCCGCCTGGCCTGCTGTGGTGATTGACCCCATCTTGCAGGCCCCGAAATCAGTACTCAGCTGCTGCGTTCCCGGTGCACTCTGCGTCATGTTCTTTGGATTTTCGAAAAACGGAACTCAGAGGGACTATGCGTGGGTGAAGCAGGGAATGATATTCCCCTTTGCAGAATTCATGGAAAGGTTCCAGGGTCAGACCCGGTTGTACAGGAGCAAACCATGTGACTTTCGAATGGCACTGGAGGAGGCAATGCTGGCAGAAGATGGTATTCTGAACTCGCAATTGGGAACAGAGGAAGTAACTAATGTAAAAGCTTATCCTGATGGACTTGTAGAGGCCACTGCTCCGTGTGTTGATCAGGAATATTACTGCCAGGATCAGGATACAAGATGTTGTGCTGGCTGTGCTTTGATGTTGCCATGCAAAACCATGAAGAAGATTAAGGACCCAAGTGGTGCACCTCAATTTTATTGCAAACACTGCTTTAAGTTACGAAAATCGAAACAATACTGTGGCATTTGCAAAAAGATTTGGCACCATTCAGATGGTGGGAATTGGGTATGCTGCGATGGTTGTAATGTTTGGGTGCATGCTGAATGTGATCAAATTTCCAGCAAACTTTTCAAGGATCTGGAAAATATCGACTACTATTGCCCAGAGTGCGAGGGAAAATTCAATCACAAATTACCAGCATTACCAGAGTGCAAGGGAAAATTCAATCACAAATTCCCAGCATCACAAATGTACAAGTCACAAATCAAATCGGTAGAGAATAGCCAAAAACCTGTTGATGTACCTGAGAAGGTAATTGTGGTGTGCAATGGCATGGAAGGAATTTACATCCCAAAGCTTCATTTAGTTATGTGCACGTGTAGCTCTTGTGGTTCAAGGAAGCAGACACTGAGTGAATGGGAAAGGCATACAGGTTGCAGAGCCAAAAAATGGAAACATAGTGTGAAAGTGAAAGGCACAATGCTACCGCTAGAAAAATGGATCACAGAAAATATTTCACAAGATGGAGTTCCCCTGCAGTTAGATCAGCAGCAGGTGCTTGGCTTTTTGCAAGAGAAGTATGAACCTGTTCATGCAAAATGGACAACAGAAAGATGTGCCGTTTGCAGATGGGTCGAAGATTGGGAAGATAATAAAATTATCATCTGTAACAGGTGCCAAATAGCAATCCACCAAGAATGTTATGGGGCTAAGAATGTTCAGGATTTTACTTCTTGGGTTTGTAGAGTATGCGAAACTCCAGATGTTGAGAGGGAGTGTTGCCTCTGTCCTGTAAAAGGAGGTGCTCTAAAGCCAACTGATGTTGAGATGCTGTGGGTTCATGTAACATGTGCTTGGTTTCGACCTCAAGTTGTTTTCCAAAATCATGAGGCGATGGAACCTGCCATAGGAATCCTCAGAATTCCTCCTAATACCTTTGTGAAGACTTGTGTGATCTGTAAACAAAGCCATGGTTCCTGTACAAGTTGTTGCAAGTGTGCTACTTATTTCCATGTGATGTGTGCATCAAGAGCAGGATATAGCATGGAATTGCATTCTATGGAGAAGGATGGGACTCAAATAACAAAGAAGCTAATATACTGTGCATTTCACAGGGTCCCAAATCCAGAATCAGTACTGGTTGTGCATACTCCCCTGGGTACTTTCTCTCCCAGAACCTCACTTCAAAATCATAAGAGATGCTTCAGGGGATCAAGGCTGGTCTCATCAAAGAATGTAGAGCTTATTGAATCATCAACCTCTGAAAGTGACAAGGTTGAGCCATTTTCTGCTGCCAGATGTCGTGTGTACCAAAGATCTCCTAATAAGAGGGCTGATGTGCCAATAATTCACTTACTGAGGGGACCCAGCCATCATTCTTTAAGTGCGATAACTCAGTTGAACAGCTATAAGGATGGTGAAAATTCTAAAGTATTTACTTCTTTCAAGGAACGTCTTCACCATTTACAGAAAACAGAAAAGCTTCGAGTTTGCTTTGGAAAATCGGGTATTCATGGATGGGGTCTCTTTGCTCGTAGAAATATACAAGAAGGAGAGATGGTTGCTGAGTATCGTGGTGAGAAGGTAAGGCGTAGTGTTGCTGATATGAGGGAAGCAAAATACCGTTCAGAAGGCAAAGATTGCTATCTGTTCAAGATCAGTGAGGAAGTGGTAATCGATGCAACCCACAAGGGCAATATAGCACGGTTAATTAACCATTCTTGCATGCCAAATTGCTATGCAAGGATTATGAGTTTTGGTGATCACGAGAGCCGGATTGTTCTTATTGCCAAGATGAATGTTTCTGCTGGTGAAGAATTAACGTATGATTACTTGTTTGATCCAGATGAGCAGGATGAACTGAAAGTTCCCTGCCTTTGCAAAGCCCCCAATTGTAGGAAATTTATGAACTAG 3153 0.4412 MLRRSDVKLGFYSNMIGNRTMKTEMPNLKRCKLEEEEEEHDSESYGCSVNLKKRNKRSKVDAAEDFSSGSGSWCSEGSYWNGGGEVQSNSNSVKLNGKTAPRGGGKGRRSPLPPPLLRSLRGRLQTLPSRFSDSVFDSWKNRAIKAEEDTDSSFEDDNDNKRFMEKQEKNKDDDNDKNTDKYNYGSEEVNVEEEKDGFVKTESNTSGISFEGAVGQKVNNGNGGVRRKEVYKPEDFALGDIVWAKCGKRYPAWPAVVIDPILQAPKSVLSCCVPGALCVMFFGFSKNGTQRDYAWVKQGMIFPFAEFMERFQGQTRLYRSKPCDFRMALEEAMLAEDGILNSQLGTEEVTNVKAYPDGLVEATAPCVDQEYYCQDQDTRCCAGCALMLPCKTMKKIKDPSGAPQFYCKHCFKLRKSKQYCGICKKIWHHSDGGNWVCCDGCNVWVHAECDQISSKLFKDLENIDYYCPECEGKFNHKLPALPECKGKFNHKFPASQMYKSQIKSVENSQKPVDVPEKVIVVCNGMEGIYIPKLHLVMCTCSSCGSRKQTLSEWERHTGCRAKKWKHSVKVKGTMLPLEKWITENISQDGVPLQLDQQQVLGFLQEKYEPVHAKWTTERCAVCRWVEDWEDNKIIICNRCQIAIHQECYGAKNVQDFTSWVCRVCETPDVERECCLCPVKGGALKPTDVEMLWVHVTCAWFRPQVVFQNHEAMEPAIGILRIPPNTFVKTCVICKQSHGSCTSCCKCATYFHVMCASRAGYSMELHSMEKDGTQITKKLIYCAFHRVPNPESVLVVHTPLGTFSPRTSLQNHKRCFRGSRLVSSKNVELIESSTSESDKVEPFSAARCRVYQRSPNKRADVPIIHLLRGPSHHSLSAITQLNSYKDGENSKVFTSFKERLHHLQKTEKLRVCFGKSGIHGWGLFARRNIQEGEMVAEYRGEKVRRSVADMREAKYRSEGKDCYLFKISEEVVIDATHKGNIARLINHSCMPNCYARIMSFGDHESRIVLIAKMNVSAGEELTYDYLFDPDEQDELKVPCLCKAPNCRKFMN* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2067 1050 ProSiteProfiles PWWP domain profile. 238 307 IPR000313 -
Dod07g2067 1050 ProSiteProfiles Post-SET domain profile. 1034 1050 IPR003616 -
Dod07g2067 1050 Pfam PHD-zinc-finger like domain 672 784 - -
Dod07g2067 1050 ProSiteProfiles SET domain profile. 908 1025 IPR001214 GO:0005515
Dod07g2067 1050 SMART PHD_3 419 471 IPR001965 -
Dod07g2067 1050 SMART PHD_3 618 665 IPR001965 -
Dod07g2067 1050 SMART PHD_3 729 785 IPR001965 -
Dod07g2067 1050 ProSiteProfiles Extended PHD (ePHD) domain profile. 670 785 IPR034732 -
Dod07g2067 1050 Gene3D SET domain 824 1050 IPR046341 -
Dod07g2067 1050 SUPERFAMILY Tudor/PWWP/MBT 229 339 - -
Dod07g2067 1050 PANTHER PHD FINGER PROTEINS 482 1050 - -
Dod07g2067 1050 MobiDBLite consensus disorder prediction 147 198 - -
Dod07g2067 1050 CDD SET_SETD1-like 897 1046 - -
Dod07g2067 1050 Pfam PWWP domain 239 335 IPR000313 -
Dod07g2067 1050 Gene3D - 224 342 - -
Dod07g2067 1050 CDD PHD_TCF19_like 420 470 - -
Dod07g2067 1050 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 11 1050 IPR025780 -
Dod07g2067 1050 MobiDBLite consensus disorder prediction 85 118 - -
Dod07g2067 1050 SMART PWWP_4 236 305 IPR000313 -
Dod07g2067 1050 SMART PostSET_3 1034 1050 IPR003616 -
Dod07g2067 1050 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 613 667 IPR013083 -
Dod07g2067 1050 ProSiteProfiles Zinc finger PHD-type profile. 417 473 IPR019787 -
Dod07g2067 1050 Pfam PHD-finger 631 665 - -
Dod07g2067 1050 Pfam PHD-finger 419 471 IPR019787 -
Dod07g2067 1050 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 668 786 IPR013083 -
Dod07g2067 1050 ProSiteProfiles Zinc finger PHD-type profile. 616 667 IPR019787 -
Dod07g2067 1050 SMART set_7 908 1031 IPR001214 GO:0005515
Dod07g2067 1050 Gene3D - 503 588 IPR010919 -
Dod07g2067 1050 Pfam SET domain 919 1024 IPR001214 GO:0005515
Dod07g2067 1050 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 412 477 IPR013083 -
Dod07g2067 1050 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 15 480 - -
Dod07g2067 1050 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 482 1050 - -
Dod07g2067 1050 SUPERFAMILY FYVE/PHD zinc finger 616 681 IPR011011 -
Dod07g2067 1050 CDD PHD_ATX3_4_5_like 618 664 IPR042011 -
Dod07g2067 1050 PANTHER PHD FINGER PROTEINS 15 480 - -
Dod07g2067 1050 SUPERFAMILY SET domain 901 1047 IPR046341 -
Dod07g2067 1050 SUPERFAMILY FYVE/PHD zinc finger 417 476 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2067 Dod-Chr7 51715738 51725000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2067 619 771 C2H2 Transcription Factor Family AT3G14740 33.125 1.55e-19 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Dod07g2067 zf-HC5HC2H_2 2.8e-28 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2067 - - gmx:100793624 1600.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2067 07 51715738 51725000 Dod07g2067 07 51715738 51725000 ECH