Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod07g2054 | ATGGAAGAGAACATGAAGTGGGAACAAGTTGGTCTCATTGGTGATCAGTTAATGCAAGGAAAGGAGCTGGCAAAGAAGCTATGCGACCATCTTGCATCCCCATCATCATCCAATGAAACCAATGTAGAGTTAATTGAGGAAATACTTTCAACCTATCAGAAGGCACTCACCATGCTGAACTGGAAGGCTAATGAGGGAGAGACTAATAAGGCCAACAAAGGCAACATGGTCATGGATTCCCATTGTTCTTCTCTTGCAAATTTGAGCCCCAGAAGTGAGGTCTTGGACCAAGAAGTAAAGCACAAAGATGTCTTCAAGAAAAGAAAGACCATGCCAAGATGGACAAAGCAAGTAAAGGTTGGCTCAGAAACTGCAATGGATGGGTCTCTGGATGATGGTTATAGCTGGAGAAAATACGGGCAGAAGGATATTCTTGGAGCTAAGTTTCCAAGAGCATATTACAGATGCACACATAGAAATGTACAAGGATGTCTAGCCACAAAACAAGTGCAAAAGTCAGATGAAGACCCAACAATATATGAGATAGCCTACAGAGGCAGACACACATGCATCCAATCTAGTCATTCAAACAGGGCATTCCAATCAAAACCAAAGATGGCCTTAGGAGAAAACAAGAATCAAAAGAACCAACTACAAGAAGAGAAAATAGAACAACAACCACAAGAGACAATTTTCACATTTGGATCATCAGATCCTGAAGTCAAAATAGAGGAGTTGGACACTAAGGAGAACATCTTCCCATCATTTTGCTTCCCTTCTCCATCAATAGGATCTGAAAACGAGGACAACATGTTCAATGATACCATGATTGAGGACCATTTCATGCAAAGCTTTTCTCCTCCATTCATATCACCAGAAACTTCAGAAACAAACATGTTCTGCATGTCACTATGCCAATTGGGCAGCAATGGACTAGGCCTAAGTGTGCAAACCTCAGATTCTGATATCACTGAGATACTTTCAGCACCAACTTCAGTCACCAATTCTCCAATACCAGACTTGGATGTTTTCTTTGATAATATGGATTTTGAAATCAATTTCCCCATCAACTCCCAACAACTTTTCTCTTGA | 1092 | 0.4084 | MEENMKWEQVGLIGDQLMQGKELAKKLCDHLASPSSSNETNVELIEEILSTYQKALTMLNWKANEGETNKANKGNMVMDSHCSSLANLSPRSEVLDQEVKHKDVFKKRKTMPRWTKQVKVGSETAMDGSLDDGYSWRKYGQKDILGAKFPRAYYRCTHRNVQGCLATKQVQKSDEDPTIYEIAYRGRHTCIQSSHSNRAFQSKPKMALGENKNQKNQLQEEKIEQQPQETIFTFGSSDPEVKIEELDTKENIFPSFCFPSPSIGSENEDNMFNDTMIEDHFMQSFSPPFISPETSETNMFCMSLCQLGSNGLGLSVQTSDSDITEILSAPTSVTNSPIPDLDVFFDNMDFEINFPINSQQLFS* | 364 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod07g2054 | 363 | Gene3D | WRKY domain | 115 | 192 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Dod07g2054 | 363 | PANTHER | WRKY TRANSCRIPTION FACTOR 41-RELATED | 1 | 356 | - | - | |
Dod07g2054 | 363 | Pfam | WRKY DNA -binding domain | 131 | 190 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dod07g2054 | 363 | SUPERFAMILY | WRKY DNA-binding domain | 129 | 190 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Dod07g2054 | 363 | SMART | WRKY_cls | 130 | 192 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dod07g2054 | 363 | ProSiteProfiles | WRKY domain profile. | 125 | 188 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dod07g2054 | 363 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 1 | 356 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod07g2054 | Dod-Chr7 | 51420986 | 51424483 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod07g2054 | 12 | 354 | WRKY Transcription Factor Family | AT2G46400 | 34.104 | 2.54e-48 | 163 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Dod07g2054 | WRKY | 2.3e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod07g2054 | - | - | aprc:113849885 | 485.337 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod07g2054 | 07 | 51420986 | 51424483 | Dod07g2054 | 07 | 51420986 | 51424483 | ECH | |
Dod04g2805 | 04 | 52077146 | 52078467 | Dod07g2054 | 07 | 51420986 | 51424483 | ECH | |
Dod01g3611 | 01 | 77458099 | 77460838 | Dod07g2054 | 07 | 51420986 | 51424483 | PCT |