Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2054 ATGGAAGAGAACATGAAGTGGGAACAAGTTGGTCTCATTGGTGATCAGTTAATGCAAGGAAAGGAGCTGGCAAAGAAGCTATGCGACCATCTTGCATCCCCATCATCATCCAATGAAACCAATGTAGAGTTAATTGAGGAAATACTTTCAACCTATCAGAAGGCACTCACCATGCTGAACTGGAAGGCTAATGAGGGAGAGACTAATAAGGCCAACAAAGGCAACATGGTCATGGATTCCCATTGTTCTTCTCTTGCAAATTTGAGCCCCAGAAGTGAGGTCTTGGACCAAGAAGTAAAGCACAAAGATGTCTTCAAGAAAAGAAAGACCATGCCAAGATGGACAAAGCAAGTAAAGGTTGGCTCAGAAACTGCAATGGATGGGTCTCTGGATGATGGTTATAGCTGGAGAAAATACGGGCAGAAGGATATTCTTGGAGCTAAGTTTCCAAGAGCATATTACAGATGCACACATAGAAATGTACAAGGATGTCTAGCCACAAAACAAGTGCAAAAGTCAGATGAAGACCCAACAATATATGAGATAGCCTACAGAGGCAGACACACATGCATCCAATCTAGTCATTCAAACAGGGCATTCCAATCAAAACCAAAGATGGCCTTAGGAGAAAACAAGAATCAAAAGAACCAACTACAAGAAGAGAAAATAGAACAACAACCACAAGAGACAATTTTCACATTTGGATCATCAGATCCTGAAGTCAAAATAGAGGAGTTGGACACTAAGGAGAACATCTTCCCATCATTTTGCTTCCCTTCTCCATCAATAGGATCTGAAAACGAGGACAACATGTTCAATGATACCATGATTGAGGACCATTTCATGCAAAGCTTTTCTCCTCCATTCATATCACCAGAAACTTCAGAAACAAACATGTTCTGCATGTCACTATGCCAATTGGGCAGCAATGGACTAGGCCTAAGTGTGCAAACCTCAGATTCTGATATCACTGAGATACTTTCAGCACCAACTTCAGTCACCAATTCTCCAATACCAGACTTGGATGTTTTCTTTGATAATATGGATTTTGAAATCAATTTCCCCATCAACTCCCAACAACTTTTCTCTTGA 1092 0.4084 MEENMKWEQVGLIGDQLMQGKELAKKLCDHLASPSSSNETNVELIEEILSTYQKALTMLNWKANEGETNKANKGNMVMDSHCSSLANLSPRSEVLDQEVKHKDVFKKRKTMPRWTKQVKVGSETAMDGSLDDGYSWRKYGQKDILGAKFPRAYYRCTHRNVQGCLATKQVQKSDEDPTIYEIAYRGRHTCIQSSHSNRAFQSKPKMALGENKNQKNQLQEEKIEQQPQETIFTFGSSDPEVKIEELDTKENIFPSFCFPSPSIGSENEDNMFNDTMIEDHFMQSFSPPFISPETSETNMFCMSLCQLGSNGLGLSVQTSDSDITEILSAPTSVTNSPIPDLDVFFDNMDFEINFPINSQQLFS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2054 363 Gene3D WRKY domain 115 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod07g2054 363 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 356 - -
Dod07g2054 363 Pfam WRKY DNA -binding domain 131 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod07g2054 363 SUPERFAMILY WRKY DNA-binding domain 129 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod07g2054 363 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod07g2054 363 ProSiteProfiles WRKY domain profile. 125 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod07g2054 363 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 356 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2054 Dod-Chr7 51420986 51424483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2054 12 354 WRKY Transcription Factor Family AT2G46400 34.104 2.54e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod07g2054 WRKY 2.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2054 - - aprc:113849885 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2054 07 51420986 51424483 Dod07g2054 07 51420986 51424483 ECH
Dod04g2805 04 52077146 52078467 Dod07g2054 07 51420986 51424483 ECH
Dod01g3611 01 77458099 77460838 Dod07g2054 07 51420986 51424483 PCT