Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1999 ATGGAAAGCCAACAAGACCCACCAAACCTTCCATCACCATCACCACCACCATTGTTTCTGCCATCACCAAAAGACTCTGATCATCATCATCCCTTCCTCTTCTCTACTCCATCCTCCCTAATTCCACCCTCTTACATGCTGCAACAAAACCCTTCATTGGACCCACCTCATCAAGGCCTGCATGATGAAAATATTGACTGGGTTAGCCTCTTCTCTGGCCAAAACAACTTGCTTGGAGTTGGAGACACCAACAACAAGGCAACAATTATCGAATGTGCTTCTTCTTCTTCCTCTTCTATGTCAAAGTCATCATCATCATCATTTTCTTTGATGGCTGAAAACGGGGCTTATCATCATGTGGTGGATGAAAAGGGTAACAATATGGAGAAAAGAAAAGGAGGAGGGAGATTGAAGAAGACAAGCAAGCCCAGGTTTGCGTTTCAAACAAGAAGTGCTGATGATATTCTTGATGACGGATTCCGATGGAGAAAATATGGACAGAAAGCTGTGAAGAACAGCATATATCCCAGAAGCTACTACCGGTGCACCCATCACACATGCACTGTGAAGAAACAAGTGCAAAGGTTATCAAAAGACACAAGCATCGTGGTGACAACTTACGAGGGAATTCACAATCACCCATGTGAGAAGCTAATGGAAGCCCTAACTCCTCTTCTGAAGCAAATGCAGTTCCTCTCTAGGTTTTAA 708 0.4379 MESQQDPPNLPSPSPPPLFLPSPKDSDHHHPFLFSTPSSLIPPSYMLQQNPSLDPPHQGLHDENIDWVSLFSGQNNLLGVGDTNNKATIIECASSSSSSMSKSSSSSFSLMAENGAYHHVVDEKGNNMEKRKGGGRLKKTSKPRFAFQTRSADDILDDGFRWRKYGQKAVKNSIYPRSYYRCTHHTCTVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMEALTPLLKQMQFLSRF* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1999 235 MobiDBLite consensus disorder prediction 1 35 - -
Dod07g1999 235 Gene3D WRKY domain 140 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod07g1999 235 ProSiteProfiles WRKY domain profile. 151 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod07g1999 235 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 57 231 IPR044810 GO:0003700
Dod07g1999 235 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 57 231 - -
Dod07g1999 235 Pfam WRKY DNA -binding domain 157 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod07g1999 235 SMART WRKY_cls 156 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod07g1999 235 MobiDBLite consensus disorder prediction 8 22 - -
Dod07g1999 235 SUPERFAMILY WRKY DNA-binding domain 149 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1999 Dod-Chr7 50827962 50831176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1999 132 235 WRKY Transcription Factor Family AT1G64000 71.154 1.68e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod07g1999 WRKY 7.1e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0677 01 11472617 11478542 Dod07g1999 07 50827962 50831176 PCT