Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1993 ATGGAAGACGATTGGGATCTCCACGCCGTAGTCAGAGGCTGTGCCACCATTGCCTCCGCCTCTTGCACCACCACCACCTCCTCTGTTTCCTCCTCCTCTTCTCTTATTGCTCCTACTACTTCTAGTTACCAACCTTCGTGTGGATTCTTCTCTATTCTCCCTGCTGAACAATCAAACCAAAAAGTTTTCTCCCTTTGCAACAACAGCAACCCCTTTGAAGCAAGGAACTCCATTGAGGAAGAACTTCATGAGCTTTGCAAGCCTTTCTTCCTCAAACCACAGCCTAAATTTCACTCCTTCCAAACCTCTTCTTCTTCTTCTTCCTTCTCTTATTCCTCTTCTCCCAGTTCAGTTCAAGCTCAGCAGAAACAGCAACAGCAGCATAATAAGCACCCTCACCATGCAGGTTCTGCCGCCGCCCCACGATCAAAAAGAAGGAAGAATCAGCTCAAGAAAGTTTGTCAAGTGCCAGCTGAGAATCTGTCCTCAGACATATGGGCATGGAGGAAATATGGGCAGAAACCCATCAAAGGGTCACCATATCCAAGGGGGTATTACAGATGTAGCAGCTCAAAAGGATGCTTGGCTAGGAAACAAGTGGAAAAGAACCGATCCGATCCAACAATGTTCATAGTTACCTATACTGGTGAGCACAACCACCCGGCTCCTACTCATAGAAACTCCCTTGCTGGCTCCACACGCCAGAAGCCACAGACACCACAAATGACCACCAATGAAGACACTGAAAAGACCATGACAAAACAAGGTTCCCCTTCCACATCAGGGGTGGAAGAAGAGGTTGTTGCACTTGCACAAAAGTCTGAGAGTGAAGAGGAGGACATGGAAGATTTGATGAATGATGATGATGGGGTGGAAGAGAATGAAATTGGTTCACCAGATATGGAGCTAACAGATGATTTCTTTGAAGGTTTGGATGAACTCACAGGATCTTCTTCAGCAGCAGCCACTGATGACTGCTTTAGTGTAGCTGCAATTCCTTCTTTGATGGCCAATAGTGCTGCCACTGCTGCTGGTGGTAGCTGA 1044 0.4703 MEDDWDLHAVVRGCATIASASCTTTTSSVSSSSSLIAPTTSSYQPSCGFFSILPAEQSNQKVFSLCNNSNPFEARNSIEEELHELCKPFFLKPQPKFHSFQTSSSSSSFSYSSSPSSVQAQQKQQQQHNKHPHHAGSAAAPRSKRRKNQLKKVCQVPAENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVEKNRSDPTMFIVTYTGEHNHPAPTHRNSLAGSTRQKPQTPQMTTNEDTEKTMTKQGSPSTSGVEEEVVALAQKSESEEEDMEDLMNDDDGVEENEIGSPDMELTDDFFEGLDELTGSSSAAATDDCFSVAAIPSLMANSAATAAGGS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1993 347 MobiDBLite consensus disorder prediction 108 151 - -
Dod07g1993 347 SMART WRKY_cls 162 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod07g1993 347 Gene3D WRKY domain 146 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod07g1993 347 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 346 - -
Dod07g1993 347 MobiDBLite consensus disorder prediction 276 303 - -
Dod07g1993 347 MobiDBLite consensus disorder prediction 220 262 - -
Dod07g1993 347 Coils Coil 267 287 - -
Dod07g1993 347 ProSiteProfiles WRKY domain profile. 157 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod07g1993 347 MobiDBLite consensus disorder prediction 217 303 - -
Dod07g1993 347 MobiDBLite consensus disorder prediction 127 151 - -
Dod07g1993 347 SUPERFAMILY WRKY DNA-binding domain 159 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod07g1993 347 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 346 IPR044810 GO:0003700
Dod07g1993 347 MobiDBLite consensus disorder prediction 108 126 - -
Dod07g1993 347 Pfam WRKY DNA -binding domain 164 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1993 Dod-Chr7 50793502 50795634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1993 1 346 WRKY Transcription Factor Family AT4G01250 44.972 1.91e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod07g1993 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1993 K13425 - gmx:100815829 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0680 01 11506999 11509270 Dod07g1993 07 50793502 50795634 PCT