Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1991 ATGGCTGACGACGGCAGCGACTTCGCCGGCACCATTTGCTCTATCTGCTACGAAGATCTCAAGCCCATTACCGAAGACCTTCAATCAATCTCCATCTGTGGCCACGTCTTCCACGAGCTCTGTTTGCAGCAATGGTTTGAGTACTGTTTGAAAGCAAAGAAGCACACTTGTCCTGTTTGCAAGCAGAGTTGCAAGGCTAGTGATGCTTGCAGGCTTTACTTCCAATCTGTTGGGGAGGTGAATGAAGATGCTGTTCTGCCTCGGAAGCCACTTGATTCTGAGGAAGATGCTGGTGTTCTGCGAAGAGAAGTTAAGAGGTTGGAGGTCAAGGTTTCTGGGCTTGGCTCGGAGTTGGAATGGAAGGGAAAGGAATTAGAAAAACTCACCAAGGAGCTTGGTGCTTGCAAGGAGCAGACAAAGGTAGAGGCAGTGTTAAAAAATGAGGCCTTGAAACAAAAAGCATCCATGCAATCCCAGCTTCGGTCTAAGGCAGAGGAACTTGAGAAGACAACTTTTGAGTGTTTTAGATTACAAGAAAGAAATATGGCTTTGGCTAAAGAAATTGCCACATTAAAATTGGTGTCGGATCTTGATCTTAATATAGAGGATGCTTTGAGGCTTGCAACTTTGGGGAACGGGTCTAACAATAAAGATACAGTAGACACATTGGCAAGATCTCTGATTGTGCGTAACAGGGAATACAGGGAATTAATTGCCAAGTGCAATCTTTTGGGGAGAGTTGAGGATCGTTACAGTAAAAAGCTTGAGAAGGCCAAGGATAAAATCATTAGATTGAAGGCAAAGGTACAAGAACTGGAGACAGCTGCTGAATCAAAAGAAAATCAATATGTGATGTCTTTGAAAGTTTCAAAGAAAAGGAAGTGTTCAAATAATCATGAAAACAGCTTCAATTCTGATACTGATGTAGTGACAGCCAGCAAGATTTCATTAAATGAACAGAAGAAACAAACTTCAACACTCAAATCTGAAATGGATCCGAATGTGAACAACAATAACTCTCTAGAATTTTTGAGGATAGAGAACTTCATTGCTACTGAAAATAAAACTATAAATTTGAGTAATGAAAGTATATCTACCCAGTCTCTTGATGAGGACAGAACTTTCATCTCAATTGATGATGACACTTCAGAATTTACCGAAACTTTGCCTGGACGTTCAAGAAACAAATGCGAAGATCAAGTCATGAATGATGCTGCTCTTAGCAGGCCTACTGTTGTGGAGTTAGATGCAGCACCAAGCATAAAGAGAGAAACAGCAATGAAAGAAAATAGTAATTTGGCTGGGTCTTCAAGACTTGGAATTGACACTGAAATGGCTAACACTTCTGCTGATGCTATGGATGAAGAGGTGACAATACTTACTAATATCAAACAAGTTCAACCCATGGTTAACATTAGAAAGGAGTCCCCAATATCCGTTGCAAATCCAGGGGACATTTGCTTTTCTGGTGGATTGCTTGGTCCTGATGGATCACATCGATACTTGGGTAAATGGTGCAAGCGTGGACAAAACAGTGAATCAACATCTACAAAAGGTTCAGGAAATGGAGATTTGATAGCTGTTGGAGCTGATGGTAGAGGTGGCAAAATTAAAGTTCTAAGGACTCCAAACCAAACCTTCTCGGATGGTAAGGAAAATTGTTCAAAAAGGTTGAAGTTAGCGCCTAAAACAAGTAGTTTGCGACCCCAGGGATGCCTGCAGATAGAGCACTTCTTTGGGAGGGTCAGTCAATAA 1755 0.4148 MADDGSDFAGTICSICYEDLKPITEDLQSISICGHVFHELCLQQWFEYCLKAKKHTCPVCKQSCKASDACRLYFQSVGEVNEDAVLPRKPLDSEEDAGVLRREVKRLEVKVSGLGSELEWKGKELEKLTKELGACKEQTKVEAVLKNEALKQKASMQSQLRSKAEELEKTTFECFRLQERNMALAKEIATLKLVSDLDLNIEDALRLATLGNGSNNKDTVDTLARSLIVRNREYRELIAKCNLLGRVEDRYSKKLEKAKDKIIRLKAKVQELETAAESKENQYVMSLKVSKKRKCSNNHENSFNSDTDVVTASKISLNEQKKQTSTLKSEMDPNVNNNNSLEFLRIENFIATENKTINLSNESISTQSLDEDRTFISIDDDTSEFTETLPGRSRNKCEDQVMNDAALSRPTVVELDAAPSIKRETAMKENSNLAGSSRLGIDTEMANTSADAMDEEVTILTNIKQVQPMVNIRKESPISVANPGDICFSGGLLGPDGSHRYLGKWCKRGQNSESTSTKGSGNGDLIAVGADGRGGKIKVLRTPNQTFSDGKENCSKRLKLAPKTSSLRPQGCLQIEHFFGRVSQ* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1991 584 Coils Coil 146 170 - -
Dod07g1991 584 SUPERFAMILY RING/U-box 11 66 - -
Dod07g1991 584 PANTHER RING ZINC FINGER PROTEIN-RELATED 3 583 - -
Dod07g1991 584 ProSiteProfiles Zinc finger RING-type profile. 13 61 IPR001841 -
Dod07g1991 584 Coils Coil 248 282 - -
Dod07g1991 584 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 68 IPR013083 -
Dod07g1991 584 CDD RING-H2 13 61 - -
Dod07g1991 584 SMART ring_2 13 60 IPR001841 -
Dod07g1991 584 Pfam Ring finger domain 12 61 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1991 471 584 C3H Transcription Factor Family AT4G01270 42.373 9.50e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1991 K11985 - gmx:100812811 735.332