Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1988 ATGGTGTCGGTGAATCCGAATCCAGCTCCGGGATTTTACTTCTTCGATCCTTCCAATATGGGGCTTCCCGGCGTCAATACACTTCCGCCGCCTGCTCCGGCCGCCGCATCCTCCGCTGCGTCCTCCGCCGTGAACTTGACGGCGGAGGATCCGAATAAGAAGATCCGGAAACCCTACACGATTACCAAGTCCAGGGAGAGCTGGACTGAACAGGAGCATGACAAGTTTCTAGAAGCTCTCCAATTATTCGATCGTGACTGGAAGAAGATTGAAGCATTTGTTGGTTCAAAAACAGTTATCCAGATACGTAGTCATGCACAAAAGTATTTTCTTAAAGTCCAGAAGAATGGAACAAGTGAACATGTACCTCCCCCTAGGCCAAAGAGAAAAGCTGCCCACCCATACCCTCAAAAAGCTCCTAAAAGCGCTCCTACTGTATCCCATGTCACCGGGCCAATGCAATCTTCATCTGCTTTCATTGAACCTGCATACATTTATAGCCCAGATTCATCATCTGTGCTTGGAACTCCAGTTAACAGTGTGCCTTTAACTCCTTGGAATTATAGTGCTGTACCGCCAGCCAGTGTGCAACAAGTGACTAAAGATGATATGGGATTGGCTGGAGCTGGACAAGCTGTTCCTCTTGCTTGTTGCTATAGCAGTAGTAATGAGAGCACCCCTCCAAACTGGCCAAGTAACAATGGGATTGATCAAAGAAACCAGGCCAAGCCAATTAAAGTCATGCCTGATTTTGCACAAGTCTACAGCTTCATTGGCAGTGTATTTGATCCAAATACAACTAATCACCTACAGAGGCTGAAACAGATGGATCCAATAAATGTGGAAACGGTATTGCTGTTGATGAGAAACCTCTCCATGAATTTAATGAGTCCTGAATTTGAGGATCAGAAGAGGCTGCTTTCGTCGTATGATGCCAGCTCTGAGGAGGCGAAGTTTCTTAATCCTTGCAGCAAATCCCTCACTGATAAATCTGAAAGTGCTGTTCTATCTGCTTAG 1017 0.4621 MVSVNPNPAPGFYFFDPSNMGLPGVNTLPPPAPAAASSAASSAVNLTAEDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKSAPTVSHVTGPMQSSSAFIEPAYIYSPDSSSVLGTPVNSVPLTPWNYSAVPPASVQQVTKDDMGLAGAGQAVPLACCYSSSNESTPPNWPSNNGIDQRNQAKPIKVMPDFAQVYSFIGSVFDPNTTNHLQRLKQMDPINVETVLLLMRNLSMNLMSPEFEDQKRLLSSYDASSEEAKFLNPCSKSLTDKSESAVLSA* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1988 338 Pfam Myb-like DNA-binding domain 65 110 IPR001005 -
Dod07g1988 338 CDD SANT 67 110 IPR001005 -
Dod07g1988 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 114 IPR017930 -
Dod07g1988 338 Gene3D - 68 115 - -
Dod07g1988 338 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Dod07g1988 338 ProSiteProfiles SANT domain profile. 63 116 IPR017884 -
Dod07g1988 338 SMART sant 64 112 IPR001005 -
Dod07g1988 338 MobiDBLite consensus disorder prediction 114 150 - -
Dod07g1988 338 PANTHER MYB TRANSCRIPTION FACTOR 2 333 - -
Dod07g1988 338 PANTHER SWI/SNF COMPLEX-RELATED 2 333 - -
Dod07g1988 338 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 63 112 IPR006447 GO:0003677
Dod07g1988 338 SUPERFAMILY Homeodomain-like 59 115 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1988 Dod-Chr7 50672332 50678647 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod07g1988 Myb_DNA-binding 2.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1988 - - adu:107472769 554.673