Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1983 ATGATATCACCTAAAGGATCTCGCATGTCTCCACAACTCCTTGCAATATTACAAACATTTGAGGCAACACTAGCAGAGCGGCTGAGAAAGCTTATACCCAAAAGCAAGGATGAAATCCTCAGCTTGTCTTGGATGAATTTAGCCATGATGACGCTTCGTGAAACTCATAATGACATACTAACCCTTATAACAGATCTTGAGCTTCCTGTGAGTGATTGGGATGACAAATGGAAGGATGTGTACTTGGACGTAAGTGTGAAGTTGCTAGATATTTGCAATGCTTTTAGCTCTGAGATCTCACGTCTTAACCAGTGTAATCTTTCAGTTAAGTGTGCACTGCATAATTTAGGATCTGCCTCTTCAAAGCTGTTTATTCGGGCTTGTTCTTCACTTGACGATTGGAGGCAGCGTGTTAATTCTGGGAACCCTAGAATTGAGAAATGCAGCACCATCTTGGATAATCTTGTGGGATCACTTGATCTGCCCAAGGTTAAAAATTCTGCCAAAGACATGTCTGTTCAATCTGCTGAGCATAGCATCAGAGGGTTTCCAACACATGGTGGCCGCTATGTTCAGTACAACATCTATGGCAACCTCTTTGAGGTTTCTAGCAAGTATCTCCCTCCTATTCGCCCTGTTGGAAGAGGTGCTAATGGTATTGTTTGTGCTGCTGTGAATGCGGAAACAGGTGAAGAAGTTGCCATTAAGAAGGTCGGCAATGCATTTGACAACAGAATTGATGCCAAAAGGACCTTACGAGAAATTAAACTTCTTCGACACATGGATCATGGAAATGTGATGTCCATTAAAGATATTATACGACCTCCACAGAAGGAGAACTTCAATGATGTGTACATTGTTTCTGAGTTAATGGACACAGATCTGCATCAAATAATACGTTCCAGTCAACCACTGGGTGATGATCATTGTCGGTATTTTATGTATCAGTTGTTACGAGGGCTCAAGTATGTACATTCAGCAAATGTTTTGCACCGTGATCTAAAGCCTAGCAATTTGCTACTGAATGCCAATTGTGACCTCAAGATTGGAGACTTTGGTCTTGCTAGAACTACGTCTGAAACTGATTTTATGACTGAGTATGTTGTTACTCGATGGTACCGAGCACCAGAGTTGCTTCTTAACTGTTCAGAATATACGGCAGCTATTGATATATGGTCTGTTGGTTGCATACTTGGTGAAATCATGACAAGGCAACCCCTTTTTCCGGGAAAAGATTATGTTCATCAACTGAGGCTGATCACGGAGTTGGTAGGTTCACCTGATGACACCAGCCTTGGATTTCTACGAAGTGATAATGCTCGCAGATATGTAAGGCAACTTCCACAATATCCAAAGCAAAATTTTCCTGCTAAATTTCCCAACATGTCTCCTGGTGCTGTTGATTTGCTGGAGAAGATGCTAGTCTTTGATCCAAACAGGCGCATTACAGTTGATGAAGCTTTGTGTCACCCGTACATGGCACCTCTCCATGATATCAATGAGGAACCTGTTTGCCCAAGACCTTTCAGTTTTGACTTTGAGCAACCCTCATTCACTGAAGAAGATATCAAGGAACTCATCTGGAGAGAATCTGTGAAGTTCAATCCTGATCCACCAATTTACTGA 1626 0.4194 MISPKGSRMSPQLLAILQTFEATLAERLRKLIPKSKDEILSLSWMNLAMMTLRETHNDILTLITDLELPVSDWDDKWKDVYLDVSVKLLDICNAFSSEISRLNQCNLSVKCALHNLGSASSKLFIRACSSLDDWRQRVNSGNPRIEKCSTILDNLVGSLDLPKVKNSAKDMSVQSAEHSIRGFPTHGGRYVQYNIYGNLFEVSSKYLPPIRPVGRGANGIVCAAVNAETGEEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHGNVMSIKDIIRPPQKENFNDVYIVSELMDTDLHQIIRSSQPLGDDHCRYFMYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELVGSPDDTSLGFLRSDNARRYVRQLPQYPKQNFPAKFPNMSPGAVDLLEKMLVFDPNRRITVDEALCHPYMAPLHDINEEPVCPRPFSFDFEQPSFTEEDIKELIWRESVKFNPDPPIY* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1983 541 SMART serkin_6 207 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1983 541 SUPERFAMILY Protein kinase-like (PK-like) 210 500 IPR011009 -
Dod07g1983 541 Gene3D Phosphorylase Kinase; domain 1 190 530 - -
Dod07g1983 541 ProSitePatterns MAP kinase signature. 242 345 IPR003527 GO:0004707|GO:0005524|GO:0006468
Dod07g1983 541 CDD STKc_TEY_MAPK 200 536 - -
Dod07g1983 541 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 183 540 - -
Dod07g1983 541 ProSitePatterns Protein kinases ATP-binding region signature. 213 237 IPR017441 GO:0005524
Dod07g1983 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Dod07g1983 541 ProSiteProfiles Protein kinase domain profile. 207 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1983 541 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 183 540 - -
Dod07g1983 541 Pfam Protein ROH1-like 17 112 IPR008511 -
Dod07g1983 541 Gene3D Transferase(Phosphotransferase) domain 1 291 520 - -
Dod07g1983 541 Pfam Protein kinase domain 211 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1983 Dod-Chr7 50616298 50625089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1983 177 536 MAP Kinase Gene Family AT4G01370 86.667 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Dod07g1983 Pkinase 9.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1983 K20600 - gmx:100779469 709.523