Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1971 ATGGGTTTTCCGGTGGGTTACACGGAGGTGTTCTTCCCGAACCTCTTCCTCCACGCGCTCGCCTTCCTTGGCCTCCTCCGAAACCTCGTCCTCCACCTCTTCCGCCTCGTCGGACTCTCCGAAATCCTTTTCCTCGACGACAACGTCGCTCCCTGGCCCGACCCAAGCCCGACCCGAATCCCCGACCGGACACCCTCCCTCTCCGCCCTCCTCATCAGGGAATTCCTCCCCGTCGTGAAGTTCGGAGAAATCGACGTCGTCGGAGGCCGTTCGGCGGCGGCTGTCGGAAGCTGCGCGGTGTGTCTGTCGGAGTTTTGCGGGGAGGACGAGATCCGGTGGTTGAGAAACTGCAGGCACATTTTCCACCGGAGTTGCGTGGATCGTTGGATGGATCATGATCAGAAGACTTGTCCTCTCTGTAGGACGCCATTTGTACCTGATGATATGGTCGATGAGTATAATCAACGGTTGTGGGCTGCTTCCGGTGTTACTGAGTATTACGTAGACTACACTTCCCTCTAA 522 0.5766 MGFPVGYTEVFFPNLFLHALAFLGLLRNLVLHLFRLVGLSEILFLDDNVAPWPDPSPTRIPDRTPSLSALLIREFLPVVKFGEIDVVGGRSAAAVGSCAVCLSEFCGEDEIRWLRNCRHIFHRSCVDRWMDHDQKTCPLCRTPFVPDDMVDEYNQRLWAASGVTEYYVDYTSL* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1971 173 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 171 - -
Dod07g1971 173 SMART ring_2 98 140 IPR001841 -
Dod07g1971 173 Pfam Ring finger domain 97 141 IPR001841 -
Dod07g1971 173 ProSiteProfiles Zinc finger RING-type profile. 98 141 IPR001841 -
Dod07g1971 173 PANTHER BNACNNG20990D PROTEIN 1 171 - -
Dod07g1971 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 148 IPR013083 -
Dod07g1971 173 CDD RING-H2 98 141 - -
Dod07g1971 173 SUPERFAMILY RING/U-box 79 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1971 Dod-Chr7 50306119 50306640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1971 1 172 C3H Transcription Factor Family AT1G63840 47.126 1.27e-51 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1971 K16281 - gmx:100790975 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0724 01 13083324 13085578 Dod07g1971 07 50306119 50306640 PCT