Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1968 ATGAGTCGCCGGAGTTCCAGCTCCGGTCACCGCACACCGGGAGGCGTCGGCTACTCTCCCAGCTACGCCTCTTCCGAGGTCAGCGCCTCCTACCACAAGTCAACCCCCGCCGCCTCGGATGGCCGGAATCCTGTCGCCGCCGCCGCTAGGTCCTTCGCCGGAATATTCACCGCCTGCTTCACGCCACCGGAGTCCACCAGCTCAAACAGCTTCGTGGATTCCGAGGTGTCCAAGAGTTCATCTGTTTCATCAGATGTTTCAAGAGTTAGTAGTCAGAGAGCACGTGGCTTGAATCGAGGTATCAACATAAGCACACATAAGGAGCCTGGTATTGTGAAATTCACCATGGAGGAAATCTACCAAGCCACAAGAAACTTCTCCCCTTCTTTCAAGATTGGCCAAGGTGGTTTTGGGGCAGTGTACAGGGCCAAACTCCTGGATGGGACTGTTGTTGCAGTGAAGCGTGCTAAGAAGAGCCTATATGAGAAGCATTTGGGGGTGGAGTTCCAGAGCGAGGTACAAACACTATCACGGGTTGAACACTTGAACTTGGTCAAGTTCTATGGCTATTTGGAGCAAGGGGATGAAAGGATTATTGTTGTGGAGTATGTTCCAAATGGGACACTTAGAGAACATTTGGATTGCATTTATGGAAAAGTTCTTGATCTCGCTTCTCGTCTAGACATTGCAATTGATGTGGCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATCATTCATAGAGACATAAAGTCTTCCAACATTCTCCTCAATGAAAATTTTCGGGCTAAGGTAGCAGACTTTGGTTTTGCTAAACAAGCGCCAGACAGTGACTCTGGCATGACCCATGTATCCACCCAAGTCAAAGGAACAGCCGGCTACTTGGACCCTGAATACTTGAAAACATATCAACTAACTGAAAAGAGTGATGTGTATTCATTTGGCGTTTTGCTTGTTGAGCTGGTCACAGGGAGACGCGCCATTGAACCTAAATTCGAACTCAAGGAGCGAATAACCGCAAAATGGGCTATGAGGAGGTTTGCTGATGGAGAAGCCATCTCAGTCTTGGACCCTAGACTAGATCAAACTGCAGCAAATTCACTGGCCCTTGAGAAGACACTTGAACTGGCTTTGCAATGTTTGGCTCCTCGTAGACAAAGCAGGCCTAATATGAAGAGATGTGCTGAGATCCTTTGGACCATCCGCAAGGATTACAGGGAGCAATCAGCTTCAGACTTTCGCTCATTTTCCTCTACTTCCCAAAGGAGCTCTTCAATAAGAGAGTGA 1296 0.4799 MSRRSSSSGHRTPGGVGYSPSYASSEVSASYHKSTPAASDGRNPVAAAARSFAGIFTACFTPPESTSSNSFVDSEVSKSSSVSSDVSRVSSQRARGLNRGINISTHKEPGIVKFTMEEIYQATRNFSPSFKIGQGGFGAVYRAKLLDGTVVAVKRAKKSLYEKHLGVEFQSEVQTLSRVEHLNLVKFYGYLEQGDERIIVVEYVPNGTLREHLDCIYGKVLDLASRLDIAIDVAHAITYLHMYIDHPIIHRDIKSSNILLNENFRAKVADFGFAKQAPDSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRAIEPKFELKERITAKWAMRRFADGEAISVLDPRLDQTAANSLALEKTLELALQCLAPRRQSRPNMKRCAEILWTIRKDYREQSASDFRSFSSTSQRSSSIRE* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1968 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Dod07g1968 431 PANTHER RECEPTOR-LIKE PROTEIN 55 10 421 - -
Dod07g1968 431 ProSitePatterns Protein kinases ATP-binding region signature. 132 158 IPR017441 GO:0005524
Dod07g1968 431 Gene3D Phosphorylase Kinase; domain 1 85 203 - -
Dod07g1968 431 MobiDBLite consensus disorder prediction 1 23 - -
Dod07g1968 431 MobiDBLite consensus disorder prediction 414 431 - -
Dod07g1968 431 Gene3D Transferase(Phosphotransferase) domain 1 204 427 - -
Dod07g1968 431 CDD STKc_IRAK 132 401 - -
Dod07g1968 431 ProSiteProfiles Protein kinase domain profile. 126 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1968 431 Pfam Protein kinase domain 131 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1968 431 SMART serkin_6 126 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1968 431 MobiDBLite consensus disorder prediction 411 431 - -
Dod07g1968 431 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 10 421 - -
Dod07g1968 431 SUPERFAMILY Protein kinase-like (PK-like) 105 404 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1968 Dod-Chr7 50243070 50246497 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1968 113 404 Receptor kinase-like Gene Family AT1G30570 44.863 5.61e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Dod07g1968 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1968 - - gmx:100792034 624.78