Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1964 ATGTCACTCTTCCTTCTCTTCCTTCTCCTCCTCATCCCAGTACCCACACACTCCACTCCTCCAACCACCATCCTCAAAGGCGCCACCACCCTCACCAGCCCCGACAACAGCTTCGAGCTCGGCATCTTCAACCTCGCCCCACACCGCTTCTACCTCGCAATCCGCTACACTACCCTCCCACCCCCGAATTTCGTCTGGGTCGCCAACCGCAACAACCCCTCCCTAACACAAGCCAACACGACCCTCCTCCTCCTCCTCGCATCCTCCCAACTCCTCCTCTCCCACCCTTCCTCCCCACAACCCCTCTGGCAAACCCCAAAACTCACCGCAACAACACAAAACAACCACACGCTTCAACTACTCGACAATGGCAATCTGGTCCTTTCATCCCAAAACGGCGACGTTCTGTGGCAGAGCTTCGACGACCCAACCGACGCGTGGCTTCCCGGCATGAACCTCACAAGAACCCGAGCCTTAACGTCATGGCGCACAAAAACTGACCCTTCACCGGGTCTTTATTCCCTGCGGCTGAAACCACCGGACTACGGTGAGTTCGAGCTTGTCTTCAACGACACCGTTCCGTACTGGTCGACAGGTAACTGGACTGGTCAGTCTTTCACCAATGTTCCCGAGATGACGATTCCGTACATTTACAAGTTTCGTTTCGATCACCCTTTTACCGAAACGGCGTCGTTTGGGTTCTCTGAGACTCAGAGCCCTTTGGATAATGGGGTGAGTCCTCCGACGATGTTCCGTGTTGAGCCGCACGGGCAGGTTAAGCAGTACACGTGGTCGAAGCAGGCAGGTTCGTGGAACATGTTTTGGTCCAGGCCTGATGATGTTTGTCAGGTTCGGGGCTTGTGTGGGAGGTTCGGAGTTTGCAATGGGAAACAGGATGAAAGTTCGAGGCTTTGTGAGTGTGTGGATGATGGGTTTAGTCCTTTGGATGAAGTGGGTTGGGGGAATGGGGATTATTCTATGGGTTGTGTTCGTGGGAAGATGGATTTTTGTGATGTGAGTGATGGTTTTGAGGATCTGGGTAGGGTTAAGTTTTGGTGGGGTAATGTGAGTTCTTTTTGGGCGAAGTCTAGGAGAATTTGTGAGAGTGCTTGTTTGGGATCTTGTAGTTGTGTTGGGTTGACTTTCACTGAAGGGAATGGTTTGTGTAGAAACTTTTATGGGTCGCTTTTTGATTTTCAGAATGTGAGTTCTTTAATTGGTGATGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGATGGTGGGTTGTTAGTGAGGGTTCCAAGAGATGGGGGTGTGAGGATTAAGAAGGGTTTGGATCATAAGGTTTTGGTTGTTGGTGTTGTTGTAGGGTCGGTTGCGGTTTTGGGTGTGATAGTGGTGACTTTGTTGGTGTTGGCGAAGAGAGGCGGATGGAGGAGAAGGAGGAAGAAGGAAATGGGGTTGGAGGAAAAAGATGGGTTTGTTCCTGTGTTGTTGAATTTGAGAGTGTTTTCTTACAAGGAGCTTCAGTTGGCGACGAGGGGTTTCTCAGAGAAAGTGGGCCATGGTGGGTTTGGGACTGTGTTCCAAGGGGAGTTGAGTGATTCCACGCTTGTTGCTGTGAAGAGGTTGGAGAGGCCAGGTGGTGGGGAGAAAGAGTTCAGGGCTGAGGTTTCCACAATTGGGAACATTCAGCATGTTAACCTTGTGAGGCTCAGAGGTTTTTGCTCTGAGAATTCTCATAGGCTATTGGTTTATGAGTACATGCCGAACGGTGCTTTGAGTGCTTATTTGCGAAAGGAAGGGCCTAGTTTGAGCTGGGATGTTAGGTTCCAGGTGGCGGTTGGAACAGCCAAAGGGATGGCGTACTTACATGAGGAGTGTAGGTGTTGCATTATCCACTGTGATATCAAGCCTGAGAACATCCTCTTGGACAGTGATTTCACTGCAAAGGTTTCGGATTTCGGTTTGGCGAAGCTCATTGGGAGGGACTTCAGTAGGGTGTTGGCGACCATGAGGGGTACTTGGGGATATGTAGCTCCAGAATGGATTTCTGGTGTGGCGATTACCACAAAAGCAGATGTTTACAGCTATGGAATGACGTTGCTTGAGCTAATCGGCGGCCGACGGAATGTGGAGGCACCGCCATCTACTGGTGGCGGTGGAGGAGAGAGTGGTTGTGAGACAGGAGAGAAGTGGTTCTTTCCTCCGGGGGCGGCGCAGCAGATAATCGAGGGTAATGTGGCTGCTGTGGTTGATAAGAAACTTGGAGATGCGTATAACATTGAGGAGGCTAGGAGGGTTGGTTTGGTTGCTGTTTGGTGCATTCAAGATGATGAGGCAATGAGACCTACCATGGGTATGGTGGTGAAAATGTTGGAGGGGTTGGTGGACGTGAGTGTTCCTCCGCCGCCTAAGTTGCTACAAGCATTGGTTACTGGGGAGTCATTTCATGGGGTCAAGGCGGATTCCGGCAATGAGATATCCACTGGTGGCAGTTTATCTGGTGGCAATTTGGAAGTGTCAACTGCTGATTCAGAATCATGTATAGGGGATGCATTTTCCCCATTCGAGGTCAATGTCAATGTCAATGTTCGATGA 2592 0.5081 MSLFLLFLLLLIPVPTHSTPPTTILKGATTLTSPDNSFELGIFNLAPHRFYLAIRYTTLPPPNFVWVANRNNPSLTQANTTLLLLLASSQLLLSHPSSPQPLWQTPKLTATTQNNHTLQLLDNGNLVLSSQNGDVLWQSFDDPTDAWLPGMNLTRTRALTSWRTKTDPSPGLYSLRLKPPDYGEFELVFNDTVPYWSTGNWTGQSFTNVPEMTIPYIYKFRFDHPFTETASFGFSETQSPLDNGVSPPTMFRVEPHGQVKQYTWSKQAGSWNMFWSRPDDVCQVRGLCGRFGVCNGKQDESSRLCECVDDGFSPLDEVGWGNGDYSMGCVRGKMDFCDVSDGFEDLGRVKFWWGNVSSFWAKSRRICESACLGSCSCVGLTFTEGNGLCRNFYGSLFDFQNVSSLIGDDGGGGGGGGGGDGGDGGLLVRVPRDGGVRIKKGLDHKVLVVGVVVGSVAVLGVIVVTLLVLAKRGGWRRRRKKEMGLEEKDGFVPVLLNLRVFSYKELQLATRGFSEKVGHGGFGTVFQGELSDSTLVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEYMPNGALSAYLRKEGPSLSWDVRFQVAVGTAKGMAYLHEECRCCIIHCDIKPENILLDSDFTAKVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYGMTLLELIGGRRNVEAPPSTGGGGGESGCETGEKWFFPPGAAQQIIEGNVAAVVDKKLGDAYNIEEARRVGLVAVWCIQDDEAMRPTMGMVVKMLEGLVDVSVPPPPKLLQALVTGESFHGVKADSGNEISTGGSLSGGNLEVSTADSESCIGDAFSPFEVNVNVNVR* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1964 863 ProSiteProfiles Protein kinase domain profile. 511 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1964 863 CDD B_lectin 24 143 IPR001480 -
Dod07g1964 863 SUPERFAMILY alpha-D-mannose-specific plant lectins 49 201 IPR036426 -
Dod07g1964 863 Gene3D Phosphorylase Kinase; domain 1 486 585 - -
Dod07g1964 863 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 17 849 - -
Dod07g1964 863 Gene3D - 16 140 IPR036426 -
Dod07g1964 863 SMART blect_4 22 143 IPR001480 -
Dod07g1964 863 SMART serkin_6 511 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1964 863 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 17 849 - -
Dod07g1964 863 Pfam S-locus glycoprotein domain 196 314 IPR000858 GO:0048544
Dod07g1964 863 Pfam D-mannose binding lectin 64 158 IPR001480 -
Dod07g1964 863 ProSiteProfiles Bulb-type lectin domain profile. 16 141 IPR001480 -
Dod07g1964 863 PIRSF SRK 1 844 IPR024171 GO:0004674
Dod07g1964 863 Pfam Protein kinase domain 514 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1964 863 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Dod07g1964 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Dod07g1964 863 Gene3D Transferase(Phosphotransferase) domain 1 586 798 - -
Dod07g1964 863 CDD PAN_AP_plant 338 404 - -
Dod07g1964 863 SUPERFAMILY Protein kinase-like (PK-like) 494 791 IPR011009 -
Dod07g1964 863 CDD STKc_IRAK 517 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1964 Dod-Chr7 50215685 50218557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1964 501 800 Receptor kinase-like Gene Family AT5G20050 45.687 1.22e-79 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dod07g1964 Pkinase 4.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1964 - - lja:Lj0g3v0252549.1 1155.58