Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1963 ATGCTGGGTGATGGGAGAGGCGTGGATTTGTACAAGCTGTTCACGGTGGTGAAAGGAAAGGGTGGATACGACGCCGTTTGTGATAGAAAGTTGTGGGATTTGGTTGCATTGGAATCAGGGTTGGACTTGAGTGTTGGGTCCTCTGTGAAACTGATTTATTCTAAGTACTTGGGTGCATTGGATTCATGGTTGAAGAAGGTTGGTGGTTGTGGTGATGGTGAGGTGCCTGCAGACTATGCATTGGTGGATAGTAGGGTTAAGTTCATAAGGCAATTGATGGAGTTGCACAATGAGTTTGCCGGATTGTTGGAGGATTACACCAATGAGAACAATGAGGCAGGCGGTGCTGGTGGCGTCGGCGTCGGCAGCGGGGAGTTCATGACTGACGTGGATGAGTGCCCAGATGGGAGGGAGGTTAGTCACAGCGATGGAGTGGAAAGTGTGGGTTTAGAGCCTGGTGGGGATAAGAGAGGTGAGAATGGAGGACATCGTGACATGGAAATGATGGGGTTCACGGTGAATGAATCCGTTCTTGGGAAGCTTTGCAAAGGAGGCGATGATGATGCAATGCCGGTGTTGGCAGAGTTTGGTGGAGGGAAAGTGCCTGCAAAGGCAGCGATGGATGTGTCGGATGGGGGGAACAGCATGCTGGGACTGTTGGGTGGAGGCAAGAAGTCGGAAGGTGATGACAATGATGGCATGATGGTGTTGGATCGGTCCGGTAGTGATAAAGAGGGTTCTTCTCGTAAGAGGAAGAGAGACTCTATATCGGATTTGCTGAGTTGGGTTGCTGGTGTTGCGAGGAATCCTTGTGATCCTGATGTTGGTTCGATGCCTGAAAAGTCAAAGTGGAAGTCTTATGATTGCAAGGTGGTATGGAAGCAGGTTTTGTTGCTTCGCGAGGCTGCCTTTCTGAAAAGAAGCTTTGAATCGAGCTGTGAACAACAATATTGGCAGAGTCAGAAGATGCATCCATCCTTGTATGATGATCATCCTGGGGCAGGCTACAACTTCAGAGAGAGGTCGAAAAGTGACAAGAGCATTTCATCTGGAAAATCTACACCATCTATTCGAAGCTCTTTAGAGTTGCCTGTAGGAACTGAAGGTGGTGTGGACAGGACACCAAGTCCTCATACTGACGATGGTGCTGAGAAACAGTTGCTCGGTTCCTCCAATGCACATTCTGGCCTTAATGGATGTGCACTGTTGCTCATCCCTCTGGGAGCACGCCATCAAGCTGAGGTGCCAGAATGGACTGGCATGACTTCTGAAAGTGATTCTAAGTGGTTGGGGACCCGAATATATCCATCAGAAAAGCCAAGTTCCAAATTTCTTATTGAAAGGGACCCCATAGGAAAGGGAAGACAAGATTCATGTGGCTGCTTGGAAGCAGGTTCCGAAGAGTGTGTCAGATTCCACATTGCTGAGAAAAGGGCTAAAGTTAAGCTTGAATTGGGTCCAGCTTTTCACGACTTGAGTCTCGATAAGACAGGTGAACAAGTAAGGCGTTTGTGGACCAGGGAAGAAGAGAAGAAATTCAAGGATGTGGTGCAATCAAGCTCTTCATCATCACCTGATGGATACTTCTGGGACTATATCTTTAGATCATTTCCTAGAAAGAGCAGGGAAGATTTGGTTAGCTACTACTACAATGTATTTCTTTTGCAGCGCAGAGGACACCAGAATAGGCATACTCCTGATGACATTGACAGCGATGATGATGAATCGATATTGAGGAATGCTTTCGGTCGTCAGACACAGAAATCTGCAAACCAGACACAGGAAGCGCGCAGCTCCATCTTATTAACCCCCAAAAAGCCGAAGTCAAAGGGAAGATAG 1839 0.478 MLGDGRGVDLYKLFTVVKGKGGYDAVCDRKLWDLVALESGLDLSVGSSVKLIYSKYLGALDSWLKKVGGCGDGEVPADYALVDSRVKFIRQLMELHNEFAGLLEDYTNENNEAGGAGGVGVGSGEFMTDVDECPDGREVSHSDGVESVGLEPGGDKRGENGGHRDMEMMGFTVNESVLGKLCKGGDDDAMPVLAEFGGGKVPAKAAMDVSDGGNSMLGLLGGGKKSEGDDNDGMMVLDRSGSDKEGSSRKRKRDSISDLLSWVAGVARNPCDPDVGSMPEKSKWKSYDCKVVWKQVLLLREAAFLKRSFESSCEQQYWQSQKMHPSLYDDHPGAGYNFRERSKSDKSISSGKSTPSIRSSLELPVGTEGGVDRTPSPHTDDGAEKQLLGSSNAHSGLNGCALLLIPLGARHQAEVPEWTGMTSESDSKWLGTRIYPSEKPSSKFLIERDPIGKGRQDSCGCLEAGSEECVRFHIAEKRAKVKLELGPAFHDLSLDKTGEQVRRLWTREEEKKFKDVVQSSSSSSPDGYFWDYIFRSFPRKSREDLVSYYYNVFLLQRRGHQNRHTPDDIDSDDDESILRNAFGRQTQKSANQTQEARSSILLTPKKPKSKGR* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1963 612 MobiDBLite consensus disorder prediction 221 252 - -
Dod07g1963 612 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 1 610 - -
Dod07g1963 612 Pfam ARID/BRIGHT DNA binding domain 4 59 IPR001606 GO:0003677
Dod07g1963 612 SMART bright_3 1 66 IPR001606 GO:0003677
Dod07g1963 612 MobiDBLite consensus disorder prediction 581 600 - -
Dod07g1963 612 SMART ELM2_2 405 456 IPR000949 -
Dod07g1963 612 CDD SANT 505 553 IPR001005 -
Dod07g1963 612 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 610 - -
Dod07g1963 612 MobiDBLite consensus disorder prediction 581 612 - -
Dod07g1963 612 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Dod07g1963 612 MobiDBLite consensus disorder prediction 135 164 - -
Dod07g1963 612 CDD ARID 4 61 - -
Dod07g1963 612 Gene3D - 1 69 IPR036431 GO:0003677
Dod07g1963 612 MobiDBLite consensus disorder prediction 225 252 - -
Dod07g1963 612 SUPERFAMILY ARID-like 4 66 IPR036431 GO:0003677
Dod07g1963 612 MobiDBLite consensus disorder prediction 329 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1963 Dod-Chr7 50190941 50195303 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Dod07g1963 ARID 2.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1963 - - gmx:100779445 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0729 01 13151316 13156114 Dod07g1963 07 50190941 50195303 PCT