Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1951 ATGGCCGTGGTGAGTCCTATCCGTGCAACTCCACAACAGGTCTATTCTGTTAGGCCTCTTCACGAAAGTGAGGTTCCTGGGATCATGACTAGTGGGAGAGAAATTGTGGAGGTTCCTAGTCCAGGTGTGGTTGATGACACAATCTTTGTAGCTGTGGCAAAAGAAGTGAAAGAAAGCAAATTAAATCTGATATGGGCAATACAGCATTCTGGAGCAAGCAGGATTTGTATCCTTCATGTTCATGTGCCACCAACTATGATCCCCTTGATGGGCGCTAAACTTCCAGCAAGTTCAGCCAAAGAGCAAGAAGTTCAAGCATATAAAGAAATTGAAAAGCAAAACATGGTTAAGATTCTGGATGACTATCTTATTATCTGTCATAAGATGGGGGTGCGGGCAGAGAAACGGCTTATTGAAAGGGATTGCATTGAAAGGGGAATTGTAGAACTTATCACAGAGTGTGGCATCCGGAAGCTTGTTATGGGAGCAGCGGCTGATAAATACCATTCTAGGAGAATGACAGAGATCAGATCTAAGAAAGCCATCTACGTACGTGACCATGCTCCAGCTGATTGTCATATACAGTTCATCTGCAAAGGACTCCGTATACACACAAGGGATTGCAGTTTGGATAGAGGTAAATCTCCTTGGGCACAACAAATGCCAGTCTCTGATGGTGGGCATTCGCCTCATATGAGATCTCCCTCTATTGCTCTGGGGCAAAATCAATGGGCAAGATTAACCAATCCAGCTCAAGAGTTACTTCGCAGAATAAGGTCTACTAATGATGGACGTGGAGGGAGCATTGCACCTGTTTCTTCTCCACAAGGGTTTTTTACTCCACAGAACAGGTTTGGCAGAGAAGGAAGTTCTGATGACTCAGATGGCCAGTCAAGGAGGAGTTTTTCAGTTTTTTCAGCATGCTCTGATAGTAGTTCATATGGACCAATGTTGTCCCCAAATTTGATTAGTGAGGGCAGTGAGAATGTATTAGACTTTAATTCGAGTGGCCTTAATCTGATTAAAGCGGATCTTTGCCGTTTATCACCTCCTAGCGTGCTGGATGGTGGAATGGATGGTACTCTCTATGTTCAACTTGAACAAGCTATGGCTGAAGCTGAGAATGCTAGGCTAGATGCATATCAAGAAACTATTAGGCGTGGGAAAGCTGAAAAAGAAGCCATTATTGCTATACTCAGGACTAAAGAAGCTGCAATGTCATATGAAAAAGAGCTGAAACTGAGAAAAGAGTTAGAGGAGGCATTAGTAAAAGGAAAGGAACAACTCGGCGATATGAAGAGCCAAAGAGACAAAGTTAAGGAAGAACTCCAAGTTGCACTAGATCAGAAATCATCTCTACAGAGTCAAATTGCATCAACTGAACTTCAGATAAAGGAGTTAGAGCAAAAGATCACACCTACAATGGATATGTTAGAAAACTACAAGAAGGAACGGGAGGATTTACAAATGCAGCGCGATAATGCGTTGAGAGACGCTGAGGAGTTGAGGAGAAGACAAGGAGAGGCCTCAACCACACATGCACTTCAACCCTTCGTAGAGTTCTCTTTTACAGAGATTGAAGAAGCTACAAGTAATTTCAACCCATCCCTAATGATTGGAGAAGGTGGATATGGAAGTATATTCAAAGGTATCCTGCGTCAAACTGAGGTTGCTATAAAAATGTTGAACCGCAACGGTAATCAAGGACTCACAGAATTTCAACAGGAGGTTGAGATATTGAGCAAGTTAAGGCATCCCAATCTTATCACACTTATAGGGGCCTGCTCAGAATTTAGTATCCTCGTCTATGAGTATTTACCCAATGGAAGCCTTGAGGATCGTCTCAGCTGCAAGGATGATACACTTCCATTATCATGGCAAATTCGAATTCGCATTGCTGCAGAACTGTGTTCTGCTCTTGTATTCTTCATTCTAGTAAACCTCACTGCATAG 1953 0.4281 MAVVSPIRATPQQVYSVRPLHESEVPGIMTSGREIVEVPSPGVVDDTIFVAVAKEVKESKLNLIWAIQHSGASRICILHVHVPPTMIPLMGAKLPASSAKEQEVQAYKEIEKQNMVKILDDYLIICHKMGVRAEKRLIERDCIERGIVELITECGIRKLVMGAAADKYHSRRMTEIRSKKAIYVRDHAPADCHIQFICKGLRIHTRDCSLDRGKSPWAQQMPVSDGGHSPHMRSPSIALGQNQWARLTNPAQELLRRIRSTNDGRGGSIAPVSSPQGFFTPQNRFGREGSSDDSDGQSRRSFSVFSACSDSSSYGPMLSPNLISEGSENVLDFNSSGLNLIKADLCRLSPPSVLDGGMDGTLYVQLEQAMAEAENARLDAYQETIRRGKAEKEAIIAILRTKEAAMSYEKELKLRKELEEALVKGKEQLGDMKSQRDKVKEELQVALDQKSSLQSQIASTELQIKELEQKITPTMDMLENYKKEREDLQMQRDNALRDAEELRRRQGEASTTHALQPFVEFSFTEIEEATSNFNPSLMIGEGGYGSIFKGILRQTEVAIKMLNRNGNQGLTEFQQEVEILSKLRHPNLITLIGACSEFSILVYEYLPNGSLEDRLSCKDDTLPLSWQIRIRIAAELCSALVFFILVNLTA* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1951 650 Coils Coil 408 505 - -
Dod07g1951 650 ProSitePatterns Protein kinases ATP-binding region signature. 539 560 IPR017441 GO:0005524
Dod07g1951 650 CDD STK_N 47 200 - -
Dod07g1951 650 Gene3D HUPs 42 165 IPR014729 -
Dod07g1951 650 ProSiteProfiles Protein kinase domain profile. 533 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1951 650 Coils Coil 363 391 - -
Dod07g1951 650 PANTHER U-BOX KINASE FAMILY PROTEIN 22 643 - -
Dod07g1951 650 PANTHER OS02G0152300 PROTEIN 22 643 - -
Dod07g1951 650 Pfam Protein tyrosine and serine/threonine kinase 538 642 IPR001245 GO:0004672|GO:0006468
Dod07g1951 650 SUPERFAMILY Protein kinase-like (PK-like) 512 642 IPR011009 -
Dod07g1951 650 MobiDBLite consensus disorder prediction 266 287 - -
Dod07g1951 650 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 61 165 - -
Dod07g1951 650 MobiDBLite consensus disorder prediction 261 302 - -
Dod07g1951 650 Gene3D Transferase(Phosphotransferase) domain 1 519 643 - -
Dod07g1951 650 SMART tyrkin_6 533 648 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1951 Dod-Chr7 50050655 50054097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1951 1 643 U-box Gene Family AT2G45910 43.721 6.06e-158 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dod07g1951 PK_Tyr_Ser-Thr 7.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1951 - - pvu:PHAVU_010G0994001 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0750 01 13473488 13480268 Dod07g1951 07 50050655 50054097 PCT