Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1949 ATGCTGTTGGTGCCAGTACATTCTAAGAACAAGTTTGGGATGTTGAGCAATTTGGATGAAGCTTGTCATGGCAATTTTGACACTGGAGAGAGTAAGAGACCAACAGGGAAAACTGGTTCTAATAAGCATAGTGTGAAGAAACTCATAGAAGAAGAGATGTTCATTGATCAAACTGCAACGAAGGATGTAGATAATGTTCAAGTAGAATCAAAGGAATCCAGGTTAAGGCATGAAGTTCCCCTGAAGGAAGATTACAAAAGGAAAAAGAAATCTAGCAATAAAAGCCGTGATATGGACATTGATGATTTTAATTTGGATGCAACCTCGAAATCCAAATCCTCACATAATCTGCACTCTAGACAGCAGTCCAAAGATAATCTTGATTTGGATAAGATAATTGAAGAGTTTTGTCATCTTAAAGGTGCTCATTCTATGATGCATGGCAATGACGGAGGAGTTCATGCACAATCAAACCAGAAGCATGCTATTTCTGAAAACATTGCAAGAGAGGTAATTCGTGAATTCGTAAATCAGATAATGCTGAATGGCAAAGATCTGGCAGAAGCTAGAAAATTCCTTTCTTCCCATGAACTTATGGAAGCACTTCAACTTATAAGTTCAGATAAGGAATTGTTTCTTGCACTTCTCCAAAACCCAAATTCAATTTTATCAAAATCTATTCAAGAGTTTGCGAATTCTCAGGGGACGAATGACAGAGAATGTAGTTCAGTTACCGGTTCCAACTTCTCTGAACATGATCTTGGCAATCCGGAACAAACTAGGGAGACTGTCAACCACAAGAAGCATAACTTCTTCAGGAAAAAAGTGAAGTCTCAGCCAAATGGTGCAACAAGTGAGAATGCCAAAACTGATTTTTCAAATAGAATTGTTATTCTGAAGCCAGGGTCGATGGGGTTGCAAAATTCTGAAACTGGAAACAACCTTGTCTCATCCCTAGATTCTCATGACAATGCCAAACACAGTGGTCCTTCTGCGAGGGGTGGTTCGCATTTTTCTCTTACGGATTTGAAAAAGAAATTAAAGCATGCGATGGGAAGGGAGAGGAATGCAAATCCTGAAGGGATCTCAAAGAAATACCCTGCTGAAGGTCAAAAGGCTAGCAGCAAAGCCATTGTTAAAGACAATGTTGGAATGAGATCTCCTAATAAGGATCATTTCTTCATTGAGAAAATTGCAAGACCTACTGTTGGCACTGTGAAAGGAGGCAAGAAAGGTGCATTGAAAGATTCTGAATTGATCATTGAACATGAAAGTGGTAGTTATCCCAGAAAAAGGGTTTCTAACTTATACACTGAGGCTAAGAAACACCTGTCTGAGATGGTAGGTAATGGAGATGAGAGCATGGATGTGTCAAGTAGGCAGATCTCGAAAACACTCGGGAGAATACTATCTCTTCCTGAGTACAACTTCTCTCCCCTCGGTAGTCCTGGAAGGGATTGGGAGCATCATTTTGTGACTGCACAGACAAGATTTTCTACTTCAGATAAAACTTGGGAGGCTAATGAGGATCATGTGTCTCCCAAACAGGCAGCCTTTGTGAATAATTTAGATCAGGAAACGGATAATCCAGAGAAGATGTCAAGCGTTCGCGATGAAGGCTCTAATAATATAGAACAAGAAATTAAGCCAGATTCAAGTGTCACAGATGAACTTAGTCAGATTGATAAAGGGAAAGACTGTAGTCCTATTAGAGATGAGATAGTTAGTGAAGTTGATGTAGCATCTGCAAAAGAGATGAATATCTCAGGATCTTCCTCAGAACCAGTTGGCCTCAGTCCTGAAAAGGGGGACCAAGGCTATGATATCTCAGAAATTCCTGAAAGTGCAAGATGTTCTCAATGTTTGAAGCTGGATGTAACAGAAGAAAACCAACAGTCTCCGCTGTCATCTCCTCACCCTTCTTCCATCACTAAGAAAACTGAAGAGCTAGAAAGTGGTGCGGATGTATGTGGGCGGCCAAGTCCTGTATCTGTTCTTGATACTCAATTCATAGAGGATGATGTCAGCCCTGGATACTCCAGATTTGAACCTGTTCAAGTACCGGTACGGCCACTACACATTCAATTTGAAGAGCAAGATTATTCGCCGGTGAATCAGATCCACAGAGGAAAATATTGTCTTGAAGAAAATGAATTGATATACAAGTACATTGAAGCAGTCCTGCAAGCCTCCGGATTGACTATGGATCAACTATTGATGAAATGCCTTTCCTCGGACAAGATACTAGATCCTTCCTTGTTTGATCAGGAAGAGTGCTTAGCAAACCATCTTTGCCATGACCAGAAGCTCCTTTATGAATGTATCAATGAAGTTCTCATGGAAGTTTGTTGGCATTACTTTGCGGCCTCACCTTGGGTATCCTTTGTGAATTCTAGCATAAGACCAACTCCAAATATGAAGATGGTTATCCTCAAGGTTTGGGAAGGAGTGTGCTGGCATTTCCTTCCCTTGTCTCCACCGCGTACTTTGGACAAAATTGTCAGGAAAGACATGGAAAAACCTGGCGCATGGATGGATCTTCGGTTCGAAGCCGAAACTATTGGTTTCGAAATGGGTGAAGTCATTCTTTCAGAACTCATGGAGGATACAATATTGAGCTGTATAGGCAAAAGTGCAGAAGATAATGCTATGTTTGGACCGATGGAAAATGCTGATTCAGAGCGAAATGAAATGGAATGA 2700 0.4078 MLLVPVHSKNKFGMLSNLDEACHGNFDTGESKRPTGKTGSNKHSVKKLIEEEMFIDQTATKDVDNVQVESKESRLRHEVPLKEDYKRKKKSSNKSRDMDIDDFNLDATSKSKSSHNLHSRQQSKDNLDLDKIIEEFCHLKGAHSMMHGNDGGVHAQSNQKHAISENIAREVIREFVNQIMLNGKDLAEARKFLSSHELMEALQLISSDKELFLALLQNPNSILSKSIQEFANSQGTNDRECSSVTGSNFSEHDLGNPEQTRETVNHKKHNFFRKKVKSQPNGATSENAKTDFSNRIVILKPGSMGLQNSETGNNLVSSLDSHDNAKHSGPSARGGSHFSLTDLKKKLKHAMGRERNANPEGISKKYPAEGQKASSKAIVKDNVGMRSPNKDHFFIEKIARPTVGTVKGGKKGALKDSELIIEHESGSYPRKRVSNLYTEAKKHLSEMVGNGDESMDVSSRQISKTLGRILSLPEYNFSPLGSPGRDWEHHFVTAQTRFSTSDKTWEANEDHVSPKQAAFVNNLDQETDNPEKMSSVRDEGSNNIEQEIKPDSSVTDELSQIDKGKDCSPIRDEIVSEVDVASAKEMNISGSSSEPVGLSPEKGDQGYDISEIPESARCSQCLKLDVTEENQQSPLSSPHPSSITKKTEELESGADVCGRPSPVSVLDTQFIEDDVSPGYSRFEPVQVPVRPLHIQFEEQDYSPVNQIHRGKYCLEENELIYKYIEAVLQASGLTMDQLLMKCLSSDKILDPSLFDQEECLANHLCHDQKLLYECINEVLMEVCWHYFAASPWVSFVNSSIRPTPNMKMVILKVWEGVCWHFLPLSPPRTLDKIVRKDMEKPGAWMDLRFEAETIGFEMGEVILSELMEDTILSCIGKSAEDNAMFGPMENADSERNEME* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1949 899 PANTHER (, RELATED) 7 878 - -
Dod07g1949 899 Pfam Protein of unknown function (DUF3741) 177 221 IPR022212 -
Dod07g1949 899 MobiDBLite consensus disorder prediction 629 658 - -
Dod07g1949 899 MobiDBLite consensus disorder prediction 351 375 - -
Dod07g1949 899 MobiDBLite consensus disorder prediction 235 254 - -
Dod07g1949 899 MobiDBLite consensus disorder prediction 629 643 - -
Dod07g1949 899 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 7 878 - -
Dod07g1949 899 Pfam Domain of unknown function (DUF4378) 722 869 IPR025486 -
Dod07g1949 899 MobiDBLite consensus disorder prediction 64 123 - -
Dod07g1949 899 MobiDBLite consensus disorder prediction 303 338 - -
Dod07g1949 899 MobiDBLite consensus disorder prediction 235 287 - -
Dod07g1949 899 MobiDBLite consensus disorder prediction 520 544 - -
Dod07g1949 899 MobiDBLite consensus disorder prediction 65 108 - -
Dod07g1949 899 MobiDBLite consensus disorder prediction 304 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1949 Dod-Chr7 49969514 49975670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1949 42 857 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 32.381 2.53e-96 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1949 - - gmx:100780609 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1949 07 49969514 49975670 Dod07g1949 07 49969514 49975670 ECH
Dod01g0752 01 13533802 13539056 Dod07g1949 07 49969514 49975670 PCT