Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1933 ATGGCCAATGAAACACTTGCAAAGCACCTTTTCCATTGGGAAACACAACCTATGAAATGGGCAATGCGACTAAGAGTCGTTCTACATCTTGCACAAGCTCTAGAGTACTGTACAAGCAAAGGGCGTGCCCTCTATCATGACCTTAATGCATATAGAGTTCTATTTGATGATGATGGTAATCCTAGGCTTTCAAGTTTTGGCCTTATGAAAAATAGTAGGGACGGGAAAAGTTATAGCACAAATTTGGCATTCACCCCTCCGGAGTATCTCAGAACTGGGAGAGTAACACCAGAAAGTGTAATTTATAGCTTTGGCACTCTTTTGCTGGACCTACTCAGTGGAAAACATATCCCTCCAAATCATGCCCTTGATTTGATTCGGGACAGAAATCTTCAGATGCTGACAGATTCTTGTTTGGAAGGCCAATTTTCTGATGATGATGGGACTGAGTTGGTACGCTTGGCATCACGCTGTTTACAGTATGAACCTAGAGAACGGCCTAATCCGAGATCATTAGTGGCTGCTTTGGCTCCTCTTCAAAAGGAAACAGAGGTTCCTTCACACGTTTTGATGGGCATCCCACATAGTGCTGCTACTTTTGCTTCATTATCTCCACTTGGTGAAGCATGCTCCAGAAAGGACATGACTGCCATACATGAAGTTCTGGAAAATCTTGGCTATAAAGATGATGAAGGAGTGGCAAATGAGTTATCATTCCAGATGTGGACTGATCAAATGCAGGATACGTTAAATTGTAAGAAAAAGGGGGATGTTGCTTTCCGGCAGAAAGATTTTAGACTAGCGATTGAGTGCTACACACAGTTCATTGATGCTGGAACAATGGTTTCTCCTACGGTCTATGCGCGGCGCAGTCTATGTTGTCTAATTAGTGACATGCCTCAGGAAGCACTGAATGATGCAGTGCAAGCAAGAGTCATTTCCCCAGTATGGCACATTGCATCTTATCTTGAATCTGTTGCCCTTGGGGGACTTGGAATGGAGAATGAAGCACAAGTAGCTCTTAAAGAGGGTACAACACTGGAAACCAGGAGGAGTTCAACTTCTAAACAAAAGTGA 1077 0.4336 MANETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDDDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPNHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPRSLVAALAPLQKETEVPSHVLMGIPHSAATFASLSPLGEACSRKDMTAIHEVLENLGYKDDEGVANELSFQMWTDQMQDTLNCKKKGDVAFRQKDFRLAIECYTQFIDAGTMVSPTVYARRSLCCLISDMPQEALNDAVQARVISPVWHIASYLESVALGGLGMENEAQVALKEGTTLETRRSSTSKQK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1933 358 SUPERFAMILY TPR-like 248 347 IPR011990 GO:0005515
Dod07g1933 358 Gene3D Tetratricopeptide repeat domain 247 358 IPR011990 GO:0005515
Dod07g1933 358 PANTHER LRR RECEPTOR-LIKE KINASE 1 357 - -
Dod07g1933 358 SUPERFAMILY Protein kinase-like (PK-like) 1 185 IPR011009 -
Dod07g1933 358 Pfam Protein kinase domain 21 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1933 358 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 357 IPR045845 GO:0004672|GO:0009742
Dod07g1933 358 Gene3D Transferase(Phosphotransferase) domain 1 2 194 - -
Dod07g1933 358 ProSiteProfiles Protein kinase domain profile. 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1933 Dod-Chr7 49850943 49854032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1933 1 179 Glycoside Hydrolase AT3G07070 31.553 1.31e-20 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Dod07g1933 Pkinase 4.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1933 K14500 - gmx:100781311 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1933 07 49850943 49854032 Dod07g1933 07 49850943 49854032 ECH