Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1918 ATGGCTCGACTTAATAGCGCCATGTTTGAGGAGAAGGTTAAGAAGATATCGGAGACTGCGATTTTTTTGCAGGATGAAGCAGCAAGTGCTTGGAATGATGTTAATTCTACCCTTGATGTCATCCAAGAAATTGTGAGTGAAGAATTTGTTGCCAAGGAAGCTGTTCAAAAAGCAACAATGGCTCTTTCTTTTGCTGAGGCGAGGCTTCAAGTAGCCATGGAATCTTTGGAGGCTGCTGAAGAAGTTTACAATCCCCCGTTAGGTGCTGATGCGAGCAATGGTGATGAAGATATAATAAAAGAGGAGAAAGCACTTTTGGTTGCTCAGGAAGCTATCAAGGAAAGCCAGACAAATTTGGAAAATTGTGAGTCGAAGCTGAGGCGCTTGCAAAGTAGAAAGGAAGAATTTCAGGATGAAGTGAACAAGTTGCACGAAATTGCAGAAAGGGCACAACTGAATGCAGTAAAAGGAGAGGAGAATGTCACAGGCATAATGCTTTTAGCAGAGCAAGCTGTTGCTGATGAACTTTTGGCTGCACAACGTGTAAATGATGCGGAGATTGCATTACTGAAAGCAGATAAGGGTGTCTCTGGTATAAATGCTGACTCTGTAGACACTGCACAAGAACAAGATGCTGTGGCTGTTCCTGTGGAGGAGAAAGTGGCTCAACATCTTTCTGGTGATGACACTGTTGAAACAGACACAGGCTTACCAGTTGGTGAAGAAACTTTGCTTGCCAATCTATCACTAGAGACACTATCTGATAAAACCAGCCAAGTTTTGGAAGACATAACACAGTCTGATTATCTGAGTGATCATGAAAATGGACAGTTGAGTGTAGATTCTTCTAAAGAAACTGAAGTCGAAGTAGAGAAGTCAAAGACTGTAGTTCAAATGAAAAGACAGGAAACACATAAGGATTTGACGAGAGATAATTCACCACTTGCTCCCACGGTTTCGTTGAAGAAGTCTTCCAGATTTTTTCCTGCGTCGTTCTTCTCTTTTACTTTAGATGGGACTGATTATCCACCAGAATCAGTTTTCCAGGGTTTCGTGGAGTCTGTGCAGAAGCAGTTGCCCAAGCTGGTTGTTGGGTTATTGTTAATTGGAGGAGGGATTGCCTTCTATGCAAATAGAGCAGACAGGAGTGGCCAGCTGCTTCAGCAACCAGAAGTCATTGCAACCACTGTTGAAGAAGTTTCCACAAGTGCAAAGCCTTTGGTTAGACAACTTCAGAAACTCCCCATGAGAATCAAGAAAATTATTGCATCATTGCCTGATCAAGAGGTGAATGAGGAGGAAACGTCCCTTTTTGATATGCTTTGGTTATTACTTGCCAGTGTTATATTTGTGCCGATATTTCAGAAAATCCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTTTCCATCATTCGTCATGTTCATGGGACAAAAGCAATAGCTGAATTTGGAGTTGTTTTTCTATTATTCAATATTGGTCCTGGAGGTGGGGCCTCCTATAAGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCACAGGTTTTGGTGACAGCTGTTGTTGTTGGCCTGGTGGCTCATTATGTTTGTGGTCAAGCAGGCCCTGCGGCTATTGTGATTGGGAATGGCCTGGCGTTATCATCCACTGCTGTTGTTTTGCAAGTGTTACAAGAGAGAGGTGAGAGCACATCACGCCATGGACGGGGCACATTTTCTGTTTTACTTTTTCAGGATTTGGCTGTTGTGCTTTTGCTAATTCTTATACCTCTTGTTTCACCTAATTCGTCCAAAGGAGGGGTTGGTTTTCAGGCCATTGCTGAAGCTCTTGGTCTGGCTGCTGTTAAGGCAGTAGTTGCCATCACTGTCATAATTGCTGGTGGACGATTGCTCCTTCGACCAATATATAGGCAGATTGCAGAAAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTTGTTATTCTTGGAACAAGTCTTCTCACAGCCAGGGCAGGACTTTCCATGGCATTGGGAGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTCGAATCTGACATTGCTCCATATCGTGGTCTTCTATTGGGTCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTATTTCAGAATTTCGAGTCATTACAGGGGCACTGGCACTCTTAATATGTGGCAAAACAATCTTGGTTACTCTTATTGGTAGAATTTTTGGAATTTCACTCATTTCTTCCATAAGAGTAGGCCTTCTTCTTGCTCCTGGCGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGTTGTCCTCTTTGCTGTTTCTTCTTGTGGGAGTTTCAATGGCCCTCACACCATGGCTAGCCGAAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCTGCATGATGTTCGAAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGTGTTGGCCAGATCATTGCACAGCTTCTTTCTGAGCGACTTATTCCTTTTGTTGCACTAGATGTGAGAAGTGATAGAGTGACAATTGGGCGTTCCCTGGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTCGAGAGGTCCTACATAAGGTTGGGGCTGACAGGGCAAGTGCTGCTGCGGTAACTCTAGATTCCCCTGGTGCAAACTACAGAACAGTTTGGGCTTTGAGCAAGCACTTCCCAAATGTGAAGACCTTCGTTCGTGCTCATGATGTTGATCATGGATTGAATTTGGAAAAGGCTGGAGCTACTGCTGTTGTCCCAGAAACATTGGAACCTAGTCTTCAACTAGCAGCTGCAGTTCTTGCTCAGGCCAAACTTCCCACATCAGAGATTGCAGCGATTATAAATGAATTCAGATCACGCCATCTAGCCGAGCTCACAGAACTACGGGAAGGAAATGGAAGTTCTCTTGGATATGGATATAACAGAATCATGAGCAAACCCAAATCCCAATCCTCAGATTCATCAGATGATACCCAAGTCTCTGATGGGACACTGGCAGTATGA 3129 0.4353 MARLNSAMFEEKVKKISETAIFLQDEAASAWNDVNSTLDVIQEIVSEEFVAKEAVQKATMALSFAEARLQVAMESLEAAEEVYNPPLGADASNGDEDIIKEEKALLVAQEAIKESQTNLENCESKLRRLQSRKEEFQDEVNKLHEIAERAQLNAVKGEENVTGIMLLAEQAVADELLAAQRVNDAEIALLKADKGVSGINADSVDTAQEQDAVAVPVEEKVAQHLSGDDTVETDTGLPVGEETLLANLSLETLSDKTSQVLEDITQSDYLSDHENGQLSVDSSKETEVEVEKSKTVVQMKRQETHKDLTRDNSPLAPTVSLKKSSRFFPASFFSFTLDGTDYPPESVFQGFVESVQKQLPKLVVGLLLIGGGIAFYANRADRSGQLLQQPEVIATTVEEVSTSAKPLVRQLQKLPMRIKKIIASLPDQEVNEEETSLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGPGGGASYKLSSMKKYVFGLGSAQVLVTAVVVGLVAHYVCGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRGTFSVLLFQDLAVVLLLILIPLVSPNSSKGGVGFQAIAEALGLAAVKAVVAITVIIAGGRLLLRPIYRQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLISEFRVITGALALLICGKTILVTLIGRIFGISLISSIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLLVGVSMALTPWLAEGGQLIASRFELHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVTIGRSLDLPVYFGDAGSREVLHKVGADRASAAAVTLDSPGANYRTVWALSKHFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAAIINEFRSRHLAELTELREGNGSSLGYGYNRIMSKPKSQSSDSSDDTQVSDGTLAV* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1918 1042 Gene3D - 433 821 IPR038770 -
Dod07g1918 1042 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 1 1042 - -
Dod07g1918 1042 MobiDBLite consensus disorder prediction 1014 1042 - -
Dod07g1918 1042 Gene3D - 842 1005 - -
Dod07g1918 1042 ProSiteProfiles RCK N-terminal domain profile. 846 968 IPR003148 GO:0006813
Dod07g1918 1042 Pfam Sodium/hydrogen exchanger family 443 814 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Dod07g1918 1042 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 444 725 IPR004771 GO:0006812|GO:0008324|GO:0016021
Dod07g1918 1042 Pfam TrkA-N domain 847 960 IPR003148 GO:0006813
Dod07g1918 1042 Coils Coil 105 153 - -
Dod07g1918 1042 Coils Coil 62 82 - -
Dod07g1918 1042 MobiDBLite consensus disorder prediction 1019 1042 - -
Dod07g1918 1042 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1 1042 - -
Dod07g1918 1042 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 843 983 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1918 Dod-Chr7 49668539 49678566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1918 1 1042 Inorganic Solute Cotransporters AT4G00630 71.362 0.0 1356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1918 - - adu:107460050 1518.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1918 07 49668539 49678566 Dod07g1918 07 49668539 49678566 ECH
Dod01g0782 01 14309228 14320020 Dod07g1918 07 49668539 49678566 PCT