Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1917 ATGGCGACTGTAGCTGGACAACTGATTTGGGAGATAGTGAAGAAGAACAACTCATTCTTGGTGAAGGAGTTCGGAAGAGGCACTCAGAGCGTCCAGTTCAGCAGGGAGGCCAACAATCTCTACAACCTCAACTCTTTCAAGTACTCTGGTTTGGCAAACAAGAAAACTGTTACCATCCAGCCTGCTGGCAAAGATCAGTCTGTGTTGCTGGCAACAACTAAGACAAAGAAGCAAAACAAGCCATCTGCGTTGCTTCACAAATCTGTCATGAAGAAGGAATTCCGTAGGATGGCAAAGGCAGTGCAAAACCAGGTGGCAGATAACCACTACAGGCCTGATCTCAAGAAGGCAGCTCTTGCAAGGTTGAGTGCTGTCAATAGGAGCCTCAAAGTTGCCAAGTCTGGTGTGAAGAAGAGAAACAGGCAGGCTGTGAAAGTCCGTGGCAGGAAGTGA 453 0.479 MATVAGQLIWEIVKKNNSFLVKEFGRGTQSVQFSREANNLYNLNSFKYSGLANKKTVTIQPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKAVQNQVADNHYRPDLKKAALARLSAVNRSLKVAKSGVKKRNRQAVKVRGRK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1917 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Dod07g1917 150 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 150 - -
Dod07g1917 150 Gene3D - 6 133 - -
Dod07g1917 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1917 Dod-Chr7 49665786 49667801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1917 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 73.427 1.03e-75 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1917 K02903 - gmx:100500189 274.248