Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1909 ATGCCTCGTGGGACTCTTGAAGTTGTGTTGATCAATGCCAAAGGCATTGAGAACAATGATTTTCTCTCTAATATAGATCCTTATGTGATTCTCTCATACCGGAGTCAGGAGCACAAAAGCACTGTGCAAAAAGATGGTGGATCAAACCCACAGTGGAATGAGAGCTTTCTTTTCACTGTTTCTGACAGTGCTTCTGAACTTAATCTGAGGATCATGGACAAAGACAATTTTAGTGCAGATGATTCTCTTGGAGAGGCCATAATTCCTATAGAACCAGTGTTTGCTGAGGGCAGCCTTCCAGAGACTGCTTACAATGTTGTGAAGGACCAAGAATATTGTGGAGAGATTAGGGTGGCTCTCACTTTTACCCCTGAGAGAGGTAGTGACCAGGGCAACAATGCGGATGAGGAAAGCTATGGTGGATGGAATCAATCGGCCAGGGACTTCTAA 450 0.4422 MPRGTLEVVLINAKGIENNDFLSNIDPYVILSYRSQEHKSTVQKDGGSNPQWNESFLFTVSDSASELNLRIMDKDNFSADDSLGEAIIPIEPVFAEGSLPETAYNVVKDQEYCGEIRVALTFTPERGSDQGNNADEESYGGWNQSARDF* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1909 149 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 149 - -
Dod07g1909 149 PANTHER C2 DOMAIN-CONTAINING 1 149 - -
Dod07g1909 149 Pfam C2 domain 4 99 IPR000008 -
Dod07g1909 149 Gene3D C2 domain 2 125 IPR035892 -
Dod07g1909 149 MobiDBLite consensus disorder prediction 124 149 - -
Dod07g1909 149 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Dod07g1909 149 MobiDBLite consensus disorder prediction 125 140 - -
Dod07g1909 149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 125 IPR035892 -
Dod07g1909 149 SMART C2_3c 5 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1909 Dod-Chr7 49543277 49545386 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1909 4 119 C2H2 Transcription Factor Family AT4G21160 33.621 6.80e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1909 - - gmx:100500006 237.269