Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1900 ATGAATATGATGAGGAGGCTGAAGAGCATTGCTTCTGGCAGGACTTCCATTTCTTCGGATCCTGGAGGGGATTCTAACTCAAAAAGAGCTAAGTTTGATCAAGAAACCGAAGGGAAGGTCAATGAGGAAACAAAAACTGTTGAGAGAGGAAGCAAAGATCAGGAGCAGCGTGCAGATGATCCGATGGAAATTACTGTTGGCACATCCAATGTATCCACCGCAGCTAGAACTGAGAAGTCAGGCTATGAGCAACTTCCAAAAGAATTGCATGAAATGAAAATTAGAGATGAGAAAGGGAAAAACAATAATGAGAAGGATGTAGAAGCAACTCTAGTGAGTGGTAATGGAACAGAAACAGGCCAAATAATTACAACTGCTATTGGTGGCCGAGATGGTCAACCAAAGCAGACAATCTCATACATGGCTGAACGAGTAGTTGGGACTGGTTCTTTCGGAGTTGTCTTCCAGGCTAAGTGCCTTGAGACTGGCGAAGCAGTTGCCATAAAGAAGGTTCTGCAAGACAAGAGATATAAGAATAGGGAGCTCCAGGTTATGCGTATGCTTGACCATCCTAACGTTGTTCAACTAAAGCACTGCTTCTTTTCAACTACCGACAAAGATGAGTTGTACCTTAACCTGGTTTTGGGGTATGTTCCTGAGACTGTCTACAAAGTTTCAAAGCAGTACATTAGGATGCACCAATATATGCCTATGATTTATGTCCAACTCTATACATACCAGATATGCCGTGCATTGAATTACTTACATCAAGTGATTGGCGTCTGTCATCGTGACATCAAACCCCAGAACCTATTGGTTAATCCTCAGACCCATCAGTTGAAGATATGTGACTTTGGGAGTGCAAAGAAGTTGGTGCCTGGTGAACCCAACATATCATACATATGCTCACGGTATTACAGAGCTCCAGAACTTATATTTGGGGCAACTGAATACACAACTGCTATTGATATGTGGTCTGTTGGTTGTGTTTTGGCTGAGCTCCTCCTAGGACAGCCATTGTTTCCTGGAGAGAGTGGGGTTGATCAGTTAGTGGAGATCATTAAGATCTTGGGAACACCAACCAGAGAAGAAATAAGGTGCATGAATCCCAACTACAATGAATTTAAGTTTCCTCAGATTAAAGCACACCCATGGCACAAGGTTTTTAACAAGAGGATGCCACCTGAAGCAGTGGATCTCGTGTCGAGGCTACTTCAGTATTCGCCAAATCTACGTTGCACTGCTTTGGCCGCATGTGCACACCCCTTCTTCAATGACCTGCGAGACCCAAATGCATGCTTGCCAAATGGGCGACCACTGCCACCTTTGTTCAATTTCACAGATCAAGAACTGGTGAATGCACCTGATGAGTTGCGCCAGCGTCTCATCCCGGAGCATGTGAGGAGTTCGAGTTGA 1416 0.4428 MNMMRRLKSIASGRTSISSDPGGDSNSKRAKFDQETEGKVNEETKTVERGSKDQEQRADDPMEITVGTSNVSTAARTEKSGYEQLPKELHEMKIRDEKGKNNNEKDVEATLVSGNGTETGQIITTAIGGRDGQPKQTISYMAERVVGTGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQVMRMLDHPNVVQLKHCFFSTTDKDELYLNLVLGYVPETVYKVSKQYIRMHQYMPMIYVQLYTYQICRALNYLHQVIGVCHRDIKPQNLLVNPQTHQLKICDFGSAKKLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSVGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIRCMNPNYNEFKFPQIKAHPWHKVFNKRMPPEAVDLVSRLLQYSPNLRCTALAACAHPFFNDLRDPNACLPNGRPLPPLFNFTDQELVNAPDELRQRLIPEHVRSSS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1900 471 ProSiteProfiles Protein kinase domain profile. 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1900 471 SMART serkin_6 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1900 471 MobiDBLite consensus disorder prediction 1 82 - -
Dod07g1900 471 CDD STKc_GSK3 135 427 IPR039192 -
Dod07g1900 471 MobiDBLite consensus disorder prediction 26 60 - -
Dod07g1900 471 Gene3D Transferase(Phosphotransferase) domain 1 220 468 - -
Dod07g1900 471 Gene3D Phosphorylase Kinase; domain 1 125 219 - -
Dod07g1900 471 PANTHER SHAGGY-LIKE KINASE 6 469 - -
Dod07g1900 471 Pfam Protein kinase domain 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1900 471 MobiDBLite consensus disorder prediction 63 79 - -
Dod07g1900 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Dod07g1900 471 ProSitePatterns Protein kinases ATP-binding region signature. 146 170 IPR017441 GO:0005524
Dod07g1900 471 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 469 - -
Dod07g1900 471 MobiDBLite consensus disorder prediction 9 25 - -
Dod07g1900 471 SUPERFAMILY Protein kinase-like (PK-like) 139 452 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1900 Dod-Chr7 49364575 49369412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1900 146 427 Core Cell Cycle Gene Families AT1G76540 35.836 1.77e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Dod07g1900 Pkinase 5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1900 K00924 - gmx:100811346 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1900 07 49364575 49369412 Dod07g1900 07 49364575 49369412 ECH