Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1899 ATGAGTTTTGGAGGGTTTCTAGACAATAACTCAGGTGGTGGTGGTGGTGGCGGTTTAAGAAACATAGCAGAAATTCCATACAGCAACGGTGCCACTACCAATAACCATAACAACAACAGCAACAGCAACATAGATAGAACAATGCCCTCTGGTGCAATCTCACAGCCTCGCCTGGTGACTCCAACTTTGGCCAAATCCATGTTCAACTCGTCACCTGGCCTCTCTCTAGCACTTCAAACCAATGTTGATGGGCAAGCGGATGTGAATAATAGAATGCCTGAGAATTTTGAGGCAAGTAATGGTTTGAGAAGGAGCAGGGAAGAAGAGCATGAGAGCAGATCTGGCAGTGATAACATGGATGGCGTCTCCGGTGATGAACAAGATGCAGCCGATAACCGTCCAAGAAAAAAACGATATCACCGACACACTCCTCAGCAAATACAAGAGCTTGAAGCGTTGTTTAAGGAGTGTCCTCATCCTGATGAGAAGCAAAGGCTGGAACTTAGCAAGAGGCTAAGCTTGGAAACAAGGCAGGTGAAGTTTTGGTTCCAAAATCGGAGAACCCAAATGAAGACCCAATTGGAGCGCCATGAGAACACACTGCTTAGGCAAGAGAATGACAAGCTAAGAGCTGAGAACATGTCCATTAGGGATGCCATGAGGAACCCCATGTGCTCAAATTGTGGTGGTCCAGCCATAATTGGTGAGATTTCACTTGAGGAACAGCACCTTAGGATTGAGAATGCAAGGTTGAAGGATGAGCTAGACCGGGTTTGTGCACTTGCTGGCAAGTTCTTGGGGCGCCCCGTATCTTCATTGACAGGCTCAATTGGTCCTCCATTGCCAAACTCGAGCTTGGAGCTTGGTGTTGGGAGCAACAATGGTTTTGGTGGGTTGAGCATTAATGTGCCTAATAATGCAACATTGCCTTTGGGGCCTGATTTTGGGGTGGGGTTGTCTACTGGCCCTTTGGCCATGGTTTCTCCTCCTCCAACTAGGCCAAATGCTCTGGTGAGTGGCTTTGACAGGTCAATTGAGAGGTCAATGTTCTTGGAGCTTGCTTTAGCTGCCATGGATGAGTTGGTGAAGATGGCACAGACTGTTGAGCCTCTTTGGATAAGGAGTTTGGAAATGGGAGGGGGAAGGGAAGTCTTGAACCATGAAGAGTACTTGAGGACATTCACTACCCCTTGCATTGGTATGAGACCCAATGGCTTTGTCACTGAGGCTTCTAGGGAGACTGGGATGGTCATCATAAACAGCTTGGCCCTTGTTGAGACTCTAATGGATGCTAATCGATGGGCAGATATGTTTCCTTGTATGATTGCCAGAACATCCACTACTGAAGTCATATCTAATGGAATAAATGGAACCAGAAATGGTGCACTTCAACTAATGCATGCTGAGCTTCAAGTCCTTTCACCACTGGTTCCGGTTCGTGAGGTAAATTTCCTGCGGTTTTGCAAGCAGCACGCAGAAGGGGTATGGGCTGTGGTAGATGTGTCCATTGATGCTACCAGAGAAACTTCTGGGGCACCCTCTTTTGTGAACTGCAGGAGGCTTCCTTCTGGTTGTGTAGTACAAGATATGCCTAATGGTTACTCCAAGGTGACATGGGTGGAACATGCAGAATACGACGAAAGTCATGTCCACGAGCTATACAGAGCGTTGTTGAGCTCAGGAATGGGCTTCGGTGCCCAACGCTGGGTCGCCACCCTTCAACGCCAATCCGAGTGCCTCGCCATCCTAATGTCCTCCGCAGCACCCTCTCGAGACCACTCAGCAATAACTGCAGGTGGTAGGCGCAGCATGCTGAAGCTGGCGCAACGCATGACCAACAACTTCTGCGCCGGAGTGTGCGCCTCCACGGTGCACAAGTGGAACAAGCTCAACAACGCCGCCAACAACGTCGACGAGGACATCAGGGTAATGACCAGGAAGAGCGTCGACGACCCCGGCGAGCCGCCGGGGATCGTGCTCAGCGCCGCCACTTCAGTGTGGCTCCCAGTCTCGCCGCAGAGGCTGTTTGACTTCCTCCGCGACGAAAGGCTGAGGAGCGAGTGGGACATACTATCAAATGGTGGCCCCATGCAGGAGATGGCCCACATCGCCAAGGGACAGGACCATGGCAACTGCGTTTCTCTCCTTAGAGCCAGTGCGATGAATTCGAATCAGAGTAGCATGTTGATACTGCAGGAGACATGCATAGACTGCGGCGGGGTCGCTTGTGGTGTACGCGCCGGTCGATATTCCTGCCATGCACGTTGTAATGAACGGTGGTGA 2283 0.5055 MSFGGFLDNNSGGGGGGGLRNIAEIPYSNGATTNNHNNNSNSNIDRTMPSGAISQPRLVTPTLAKSMFNSSPGLSLALQTNVDGQADVNNRMPENFEASNGLRRSREEEHESRSGSDNMDGVSGDEQDAADNRPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLSLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSLTGSIGPPLPNSSLELGVGSNNGFGGLSINVPNNATLPLGPDFGVGLSTGPLAMVSPPPTRPNALVSGFDRSIERSMFLELALAAMDELVKMAQTVEPLWIRSLEMGGGREVLNHEEYLRTFTTPCIGMRPNGFVTEASRETGMVIINSLALVETLMDANRWADMFPCMIARTSTTEVISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDATRETSGAPSFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESHVHELYRALLSSGMGFGAQRWVATLQRQSECLAILMSSAAPSRDHSAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNNAANNVDEDIRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETCIDCGGVACGVRAGRYSCHARCNERW* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1899 760 CDD START_ArGLABRA2_like 347 578 - -
Dod07g1899 760 CDD homeodomain 135 193 IPR001356 GO:0003677
Dod07g1899 760 MobiDBLite consensus disorder prediction 100 116 - -
Dod07g1899 760 MobiDBLite consensus disorder prediction 30 53 - -
Dod07g1899 760 SMART START_1 352 579 IPR002913 GO:0008289
Dod07g1899 760 Pfam START domain 352 578 IPR002913 GO:0008289
Dod07g1899 760 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 80 740 - -
Dod07g1899 760 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 80 740 IPR042160 -
Dod07g1899 760 MobiDBLite consensus disorder prediction 86 143 - -
Dod07g1899 760 ProSiteProfiles START domain profile. 343 582 IPR002913 GO:0008289
Dod07g1899 760 ProSiteProfiles 'Homeobox' domain profile. 133 193 IPR001356 GO:0003677
Dod07g1899 760 SUPERFAMILY Bet v1-like 600 737 - -
Dod07g1899 760 SMART HOX_1 134 197 IPR001356 GO:0003677
Dod07g1899 760 ProSitePatterns 'Homeobox' domain signature. 168 191 IPR017970 GO:0000981|GO:0006355
Dod07g1899 760 SUPERFAMILY Homeodomain-like 119 193 IPR009057 -
Dod07g1899 760 Gene3D - 421 577 IPR023393 -
Dod07g1899 760 Coils Coil 187 219 - -
Dod07g1899 760 SUPERFAMILY Bet v1-like 345 579 - -
Dod07g1899 760 Gene3D - 122 209 - -
Dod07g1899 760 Pfam Homeodomain 136 191 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1899 Dod-Chr7 49345232 49354614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1899 1 740 Homeobox Transcription Factor Family AT3G61150 62.819 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod07g1899 START 7.5e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1899 K09338 - gmx:100783614 1182.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1899 07 49345232 49354614 Dod07g1899 07 49345232 49354614 ECH
Dod07g1899 07 49345232 49354614 Dod01g0815 01 14834376 14840940 ECH