Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1873 ATGGCGGTGGAAGATTGTGGTGATGCTGCTTCAATTGATGCTCTTTCCACGGAAGACTGGTTGTTACATGCACAGGAGCTTGTTCCTGCAGCACTTGCTAAGGCAAGTGAGGTTAAGGGGTTCCCTGGCAGGTGGAAGATGATCGTTTCGAAACTGGAGCAGATCCCTTCGCGGTTATCGGATTTGTCTAGCCACCCTTGCTTCTCCAAGAATGCTCTTTGCAAGGAGCAATTGCAGGCTGTGTCAAAGTCACTCAGAGAAGCAATTGAATTGGCTGAGTTGTGTGTGAAGGAGAAGTATGAGGGTAAGCTTAGGATGCAAAGTGATCTTGATGCGTTAACTGGGAAACTTGATTTGAATTTGAAGGATTGCAGCTTGTTGATAAAGACTGGTGTGCTTGGTGAGTCTACTTTGCCGTTGAATTTGTCTGGTATTGTGGCTGAATCAGAAGTTGCAACACACAGCAACATACGGGAGTTACTTGCACGCCTTCAAATTGGTCATCTAGAAGCAAAACATAGAGCTTTGGATAGGCTCTATGATGCGATGAAAGAGGATGAAAAGAATGTTTTGGCTGTTCTTGGTAGGAGCAATGTTGCTGCCTTGGTTCAGCTGCTTACAGCGACATCTCCAAGGATTAGGGAGAAGGCAGCAACTGTTATATGCACTCTTGTGGAATCCGGTTGCTGTGAAAACTGGTTGGTTTCTGAAGGAGTTCTGCCACCCCTTATTAGGCTTGTTGAATCTGGCAGTGCTGTAGGGAAAGAGAAGGCCACGGTTTCTCTTCAGAGGCTGTCTATGTCGGCCGAAACAACCCGCGCAATCGTTGGACACGGCGGGGTTCGGCCACTAATTGAGCTTTGCCAAACTGGTGATTCTGTGTCACAGGCTGCAGCTGCTTGTACTCTGAAGAATGTGTCATCTGTACCTGAGGTGAGGCAGGTTTTGGCTGAAGAAGGCATTGTGAAGGTTATGATTGATCTCCTTGGCTGTGGAATTTTGTTGGGTTCGAGAGAGTATGCCGCCGAGTGCTTGCAGAATCTCACTGCAAGCAATGAGAATCTGAAAAGGTCTGTCATATCAGAAGGTGGATTTAGGAGCCTTTTGGCTTATCTTGATGGTCCACTCCCTCAAGAATCTGCAGTTGGAGCACTGAGGAATTTGGTTGGTTCAGTTTCTGAGGATGTTTTGGATTCACTCGGTTTGCTTCCCCGTTTGGTTCATGTGCTTAAGTCTGGATCCTTGGGAGCTCAGCAAGCCGCAGCATCGGTTATATGCCGCGTTTGTGGCTCAATGGAGATGAAGAAAATGATTGGTGAAGCTGGTTGCATCCCTCTTCTTGTCAAGATGCTTGAGGCCAAAGCAAACAGTGCTAGAGAGGTTGCTGCACAAGGAATTGCAAGCTTGATGGTTCTGTCCCAAAACCGAAGAGAGGTTAAGAAGGATGATAAAAGTGTGCCAAATCTGGTCCAGTTGCTTGATCCAAGTCCACAGAACACTGCAAAGAAGTATGCAGTTTCTTGCCTTGGATCACTCTCTTCATGCAAGAAGTGCAAGAAGCTGATGATTTCATATGGAGCAATAGGGTATCTGAAGAAGCTTACTGAGATGGACATTCCAGGAGCTAAAAAGCTGCTTGAGAGATTGGAAAGAGGGAAACTGAGAAGCCTGTTTAGAAGAAAATAA 1686 0.4644 MAVEDCGDAASIDALSTEDWLLHAQELVPAALAKASEVKGFPGRWKMIVSKLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSKSLREAIELAELCVKEKYEGKLRMQSDLDALTGKLDLNLKDCSLLIKTGVLGESTLPLNLSGIVAESEVATHSNIRELLARLQIGHLEAKHRALDRLYDAMKEDEKNVLAVLGRSNVAALVQLLTATSPRIREKAATVICTLVESGCCENWLVSEGVLPPLIRLVESGSAVGKEKATVSLQRLSMSAETTRAIVGHGGVRPLIELCQTGDSVSQAAAACTLKNVSSVPEVRQVLAEEGIVKVMIDLLGCGILLGSREYAAECLQNLTASNENLKRSVISEGGFRSLLAYLDGPLPQESAVGALRNLVGSVSEDVLDSLGLLPRLVHVLKSGSLGAQQAAASVICRVCGSMEMKKMIGEAGCIPLLVKMLEAKANSAREVAAQGIASLMVLSQNRREVKKDDKSVPNLVQLLDPSPQNTAKKYAVSCLGSLSSCKKCKKLMISYGAIGYLKKLTEMDIPGAKKLLERLERGKLRSLFRRK* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1873 561 Pfam Armadillo/beta-catenin-like repeat 270 307 IPR000225 GO:0005515
Dod07g1873 561 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 3 561 - -
Dod07g1873 561 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 3 561 - -
Dod07g1873 561 SUPERFAMILY ARM repeat 157 538 IPR016024 -
Dod07g1873 561 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 238 280 IPR000225 GO:0005515
Dod07g1873 561 Gene3D - 335 549 IPR011989 -
Dod07g1873 561 SMART arm_5 351 390 IPR000225 GO:0005515
Dod07g1873 561 SMART arm_5 472 514 IPR000225 GO:0005515
Dod07g1873 561 SMART arm_5 186 226 IPR000225 GO:0005515
Dod07g1873 561 SMART arm_5 268 308 IPR000225 GO:0005515
Dod07g1873 561 SMART arm_5 309 350 IPR000225 GO:0005515
Dod07g1873 561 SMART arm_5 431 471 IPR000225 GO:0005515
Dod07g1873 561 Gene3D - 153 334 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1873 Dod-Chr7 48462443 48466454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1873 405 544 U-box Gene Family AT2G23140 30.496 3.21e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1873 - - gmx:100809488 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1873 07 48462443 48466454 Dod07g1873 07 48462443 48466454 ECH