Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1870 ATGTCCAAATCAAGCAAGCCAACCATCGAAAAGTTCATTGGGGTGAGGCAAAGGCCTTTAGGGAGGTGGGTGGCTAAGATCAAGGACTCAACTCAACATGTGAGTGAAGTCCTAATTGGGCCTGATGCAAATAAGAATGGCTTGAGCTTTGCTTCATTGAAAGCCAAACTGAGCAAGCATTTTCAGAACATGATGGCAAAGGCAAGTGATCATAACAATAATAATTCATCATCACATAGTAGGGTAAGTGATCATTTTGCATTTGCTATCATATTCAACCATAGGAGTTATTGTCACCAATCATCAATGCCACCAATAGATATGAAGAGCATTGAGAAAGTGGTACAATCTAGCATCATTGTGCCCCCTTCATTGGAAAATGATCATCAATATCATCATGCTGCTTCATGGGAAAGTTCTAGTGTATCTGATTATAGTAGTTCTAAGTGGGTTGGATTCAAGCAACATGGGTTGGACTCTGATGGGTCAGAGATTGAGAATACTTGTGTTGGTGATCAAGGGCACTTGGACCAATTAATGGAGTAG 546 0.4066 MSKSSKPTIEKFIGVRQRPLGRWVAKIKDSTQHVSEVLIGPDANKNGLSFASLKAKLSKHFQNMMAKASDHNNNNSSSHSRVSDHFAFAIIFNHRSYCHQSSMPPIDMKSIEKVVQSSIIVPPSLENDHQYHHAASWESSSVSDYSSSKWVGFKQHGLDSDGSEIENTCVGDQGHLDQLME* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1870 181 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 42 180 - -
Dod07g1870 181 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 42 180 - -
Dod07g1870 181 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 34 - -
Dod07g1870 181 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1870 Dod-Chr7 48449099 48449801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1870 3 34 AP2-EREBP Transcription Factor Family AT5G19790 59.375 7.86e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1870 K09286 - gmx:100799444 162.155