Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1866 ATGGTGTCTGACAAGTACATTATTCCAATACCTGGAATCAAAGTTTTGGTGGTGGATGCTGACTCCACATGCTTAGCTTTGGTATCCAAAATGCTTCGGACACTAGGATATGAAGTTTTGACTGCTAGACTAGCTTATGAAGCCTTATCCATAATTGAGAAGAATGAGCTTCACCTTGTGCTCATGGACAATCACTTGCCCGACATGGAAATGTATGGGCTCATTGAGATAATCAGAGAACGCTATGATATACCATCTTTTATTATGAGTGCTGATGATGATGAGCATTCAATGGTAAAAGCACTATGCAAAGGAGCCAAACTGTGTTTTAGAAAGCCGGTTGTGATTTCTGATCTAAAGGGCCTGTGGCAATTTGCATTGTGGAAGAGAAAAGATAGAACAATAGTGACTGAGGATGTATCAAAGGGAGTTGTAGCAAACAAGGATGAAAAATGCCAACCATCCAAGAATAAAGGGAAAAGGAGTCTCCAAATTGAAAAAGGGAAAGAGAAAGAACCTCTTGATAATGACAAAGGAGGAGAGAAAAATGAACCATCAGTCCAGAAAAGGAATAGGATTACCTGGACTAATACTACTCCAAAGAAAATACATGAGTTTATGAATGTTCCAGGAATTACAAAACAACATGTTTCAAGCTACTTACAGAAATATCGTCAAACGTTGAAACAGCAAGCTGATGAAATGCAACAGTATAAGAATAGACCACCATCTGATTCAATTTTGGAATCACTGCATTTGTCTCAGAAGGGTCTCACAAGTTGCATGACTATGCAATTTCTTGTTTCTCCTTCATATTTTCCTTCCCTGCAAATTCCAAGTGTTCAAGAGTCACCTTTCGGCCAAAACCAGCTGTGTCTGCAAGGCACACTGCAAGGAATTGCCCGTGGCACATCTTCTGGCTTTGGTGAATTTAACTTGAATGGTAATGGAGAGGGACTTGCAGAATTCAGCCAGGTTGAAAATGCTACTAATGGAAGTGTTTTCAATGAAGTTTCATTACTCTCTAGTGGAACTGTTTTCAATAAAGATGCATTACTCTCAAATGGAAGTGCTTTCAATGAAGGTGCATTGTTCTCAAATGGAACTGTTTTCAATGGAGATGCATTACTCTCTAATGGAACTGTTTTCAATAAAGATGCATTGCTCTCAAATGGAAGTGTCTTCAATGAAGGTGCATTGCTCTCAAATGGAAGTGTCTTCAATGAAGGTGCATTGCTCTCTAATGGAGATGTTTCTAATGAAGGTGCATTGCTCTCAAATGGAAGTATTTTCAACGAAGGTGCATTCCTCTCAAATGTAAGTGTTCTCAATGAAGGTGCATTGCTCTTAAATGGAAGTGTTCTCAATGAAAGTGCATTACTCTCAAATGGAAGTGTTCTCAATGAAGGTGCATTTCTCTCTAATGGGAGTGTTTTCAATGAAGGCACAGTACTCTCAAATGGAAGTGTTCTCAATGAAGGTGCATTTCTCTCTAATGCAAGTGTTCTCAATGAAGGTGCATTACTCCCTAATGGAACTGTTCTCAATGAAGGTGCATTTCTCTCTAATGGAAGTGTTCTCAATGAAGATGCATTACTCTCATGTGTGGATTATATAACAACAACTAAACCTTGTCTCACTGGATGGGATCGATCACTTGGATCAGATAACGCCTCCTGTGTGGATTATACTACTGACAAAAATGAAATGCAATGCTCAACACTGCTAACCGACGACATGCGCCAACAATTTCCCCCACAACTTCCTGTTCAGCCAGCACTATCACATGAGAAGGAACTTGACATTTTTGTGGCCAAAGCAGCCAACATCGATGATATTTTTAACAGTTCAACAGAAACTCAGCAGATATTTGGTGAGGATTTAGATACCTGGTTATCAAGATTTTAG 1908 0.3931 MVSDKYIIPIPGIKVLVVDADSTCLALVSKMLRTLGYEVLTARLAYEALSIIEKNELHLVLMDNHLPDMEMYGLIEIIRERYDIPSFIMSADDDEHSMVKALCKGAKLCFRKPVVISDLKGLWQFALWKRKDRTIVTEDVSKGVVANKDEKCQPSKNKGKRSLQIEKGKEKEPLDNDKGGEKNEPSVQKRNRITWTNTTPKKIHEFMNVPGITKQHVSSYLQKYRQTLKQQADEMQQYKNRPPSDSILESLHLSQKGLTSCMTMQFLVSPSYFPSLQIPSVQESPFGQNQLCLQGTLQGIARGTSSGFGEFNLNGNGEGLAEFSQVENATNGSVFNEVSLLSSGTVFNKDALLSNGSAFNEGALFSNGTVFNGDALLSNGTVFNKDALLSNGSVFNEGALLSNGSVFNEGALLSNGDVSNEGALLSNGSIFNEGAFLSNVSVLNEGALLLNGSVLNESALLSNGSVLNEGAFLSNGSVFNEGTVLSNGSVLNEGAFLSNASVLNEGALLPNGTVLNEGAFLSNGSVLNEDALLSCVDYITTTKPCLTGWDRSLGSDNASCVDYTTDKNEMQCSTLLTDDMRQQFPPQLPVQPALSHEKELDIFVAKAANIDDIFNSSTETQQIFGEDLDTWLSRF* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1866 635 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR8-RELATED 12 356 - -
Dod07g1866 635 SMART REC_2 13 123 IPR001789 GO:0000160
Dod07g1866 635 MobiDBLite consensus disorder prediction 149 188 - -
Dod07g1866 635 CDD REC_typeB_ARR-like 15 127 - -
Dod07g1866 635 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 356 IPR045279 GO:0009736
Dod07g1866 635 Pfam Response regulator receiver domain 15 120 IPR001789 GO:0000160
Dod07g1866 635 SUPERFAMILY Trimeric LpxA-like enzymes 357 530 IPR011004 -
Dod07g1866 635 ProSiteProfiles Response regulatory domain profile. 14 127 IPR001789 GO:0000160
Dod07g1866 635 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 198 226 IPR006447 GO:0003677
Dod07g1866 635 MobiDBLite consensus disorder prediction 149 189 - -
Dod07g1866 635 Gene3D Hexapeptide repeat proteins 348 536 - -
Dod07g1866 635 Gene3D - 10 137 - -
Dod07g1866 635 SUPERFAMILY Homeodomain-like 189 229 IPR009057 -
Dod07g1866 635 SUPERFAMILY CheY-like 11 128 IPR011006 -
Dod07g1866 635 Coils Coil 221 241 - -
Dod07g1866 635 Gene3D - 181 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1866 Dod-Chr7 48417790 48424044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1866 12 258 Response Regulator Gene Family AT4G31920 31.579 4.88e-31 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod07g1866 Response_reg 3.7e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1866 - - ahf:112728429 293.508