Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1859 ATGGCCGCGGAAGCTTCAACAACAAACATTGATCTCACACTCGGAGACCCAAAGGGGCCCAAGGAGGAGCCCGAGACGGAGGAGAGCGCGCCATCGGCAATACGGGTGATGCCGGTAGCGGTGCACGTGCCAGCCGGGATGTCCATGACCATGCAAGTGAACAAGGCCCTGGCCCAAGCCCAAGCCCAAGCCCAGGGCCAAACCCCACCGCCTCAAAAAAGAGCCTCAACAAAGGACCGCCACACGAAAGTGGAGGGGCGGGGCCGGAGGATCCGAATGCCCGCCACGTGCGCGGCCCGGATCTTCCAGCTGACCCGGGAACTCGGCCACAAGTCCGATGGAGAAACCATCCGGTGGCTCCTCGAGCACGCCGAGCCCGCCATCATCGCCGCCACGGGAACCGGCACCGTCCCCGCCATCGCCATGTCCGTGAACGGCACACTCAAAATCCCAACAACCTCCCCAAACACAAAAACAAACACAACAACCACAGTACCAGGATCCGACCCGGAACCCGGCGGCGCTGACCCGCCTGGTAAGAAGAAGCGCAAGCGACCCTCGAACAGTGCTTACGTGGACGTAAGCCACGTAACCGACGGTGCGGTTTCCGTGTCCGCGGGCCTGGCCGTTACAACGAACTCCGTAACAAACTCTGTAACCGTCGCGGCGCCAGTTACTAACTCCGTAACTGCCGCGATTCCGTTTCCGCAAAACGCGGTGCCTGCCATGTGGGCTGCGATTCCTTCGAACGCGTTCTTCGTGGTGCCGTCTATGGCGGCGGCGGCGGCGGCGGGGCCTTCGAACGCCCCGCAGTTTTTTACGATAGCGCGTCCGATTTCGGCGTTTGTTTCGTCCGTGGTGGCGCCGGTTCAGTTGCAGCCGGTAGGCGCGACGGCTCCGTCGTCGAAGTCGCCGCCAAGAGCTACGGTTATGGCGCCGAGTACGACGACAGCGGCGGCGACGACGACGACGACGCAGATGCTGAGGGATTTTTCGTTGGAGATTTACGACAAGAAGGAGCTTCAGTTCATGTCGCGGTCGAGTTCGAAGAATTGA 1056 0.6174 MAAEASTTNIDLTLGDPKGPKEEPETEESAPSAIRVMPVAVHVPAGMSMTMQVNKALAQAQAQAQGQTPPPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPNTKTNTTTTVPGSDPEPGGADPPGKKKRKRPSNSAYVDVSHVTDGAVSVSAGLAVTTNSVTNSVTVAAPVTNSVTAAIPFPQNAVPAMWAAIPSNAFFVVPSMAAAAAAGPSNAPQFFTIARPISAFVSSVVAPVQLQPVGATAPSSKSPPRATVMAPSTTTAAATTTTTQMLRDFSLEIYDKKELQFMSRSSSKN* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1859 351 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 349 IPR005333 GO:0003700
Dod07g1859 351 MobiDBLite consensus disorder prediction 58 73 - -
Dod07g1859 351 MobiDBLite consensus disorder prediction 175 189 - -
Dod07g1859 351 PANTHER TRANSCRIPTION FACTOR TCP9 19 349 - -
Dod07g1859 351 MobiDBLite consensus disorder prediction 58 87 - -
Dod07g1859 351 MobiDBLite consensus disorder prediction 296 318 - -
Dod07g1859 351 MobiDBLite consensus disorder prediction 1 33 - -
Dod07g1859 351 MobiDBLite consensus disorder prediction 147 168 - -
Dod07g1859 351 Pfam TCP family transcription factor 76 153 IPR017887 -
Dod07g1859 351 ProSiteProfiles TCP domain profile. 77 131 IPR017887 -
Dod07g1859 351 MobiDBLite consensus disorder prediction 147 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1859 Dod-Chr7 48375937 48377121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1859 68 351 TCP Transcription Factor Family AT2G45680 50.920 2.13e-77 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod07g1859 TCP 3.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1859 - - gmx:100804760 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1859 07 48375937 48377121 Dod07g1859 07 48375937 48377121 ECH