Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1858 ATGGACAAACAAGGATCATCCTCATCACCATACCATTATCCAAATCCACGACCTCAAGGTCCTTCAGGAGGTGCTGCTGATCCATATAATGCAACTCATCCTCCATATCCATACCCTTATTATCAACCTCCACCTGCACCTTTCTCCCACTATGCATACCCTGTATCACCTTCCTCACCCTCTCATTCTCCTCCCTTAGGCTCTTCATATCCACAACCTCCTCAATCCCCTTCCACACCCTCACATTCTGTTCCCTTAGGCTATGGTGGCCCTCCTGACTTTAACCGGCCTCCGCCGCAGCTGAGCTATTCGAGGTCTCAGCCATATTATCCTTCCCCTTACCACCAAGGTCCTTCAGGAGTTGTGTCACAAACTAGTGATAGCAATTCAAACCCTCCTTTGGAGCATGCTATGGGCAATGTCCGGCTTTCGGATGGCCGGCAGAGTGCTCCTGCATCGCCCCCTGCACCTGCTGTGCAGCCATATTTCGGCTCAGGTTTGAGACATTCCAACTCTCTGGATCATTCTATGCGTCCGGCTTATTCTGACATGATTGATGAATCGGTGAATAGTCAGAGCTTGGCACTGGTTCCGGCGGAGGGTAGAACTTCTTTGAGAGTTTTGCTTCTACATGGAAATTTAGATATATGGGTTCATAGAGCCATAAATCTTCCAAATTTGGACATGTTCCACAAAACTTTGGGGGATATGTTTGGTAGATTTCCCGGGAGTGAAGGGGCAGCGAATGGGAAGAATACCAGTGATCCTTATGTGGCAATTACTGTACCAAATGCTGTGATTGGGAGGACTTTCGTGATTGCCAATGATGAGAACCCCGTTTGGGAGCAGCATTTCTATCTTCCTGTTGCGCATTATGCTGCTGAAGTGCAATTTGTCGTTAAGGACAATGATGTTGTGGGTTCGCAGCTCATTGGCATTGTGGCGATTCCGGTGGAACAAATTTACTCAGGGGAAAGAGTAGAAGGAACCTACCCAATCCTAAGCAGTAATGGGAAACCATGCAAGCCAGGTGCTGCCTTGAGTCTATCGATGCAGTACATTCCGATGGCGAAACTGAGCACTTATCACCTAGGAGTAGGAGCAGGTCCTGACTATGTTGGGGTTCCTGGCACCTATTTTCCATTGAGGCAAGGTGGAAGAGTTACTTTATATCAAGATGCCCATGTTCCGGATGGCTGCCTCCCTAACGTGAGGCTAGACAATGGGATGCATTATGTTAATGGACAGTGTTGGGCCGACATATTTGATGCCATACGTCAAGCTAAGCGTCTGATTTATATTACTGGGTGGTCAGTGTGGCACAAAGTTAGGCTGGTAAGGGATGCTGCTGATAAATCAGATATCATCTTGGGCGATCTTCTGAGGTCTAAGTCGCAGGAAGGAGTAAGAGTGCTTCTCCTTATCTGGGATGACCCTACTTCAAGAAGCATTCTTGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTCGACGATTTTTCAAGCACTCTTCTGTGCAAGTGTTGCTTTCTCCTCGCCTGGCTGGAAAACGGCTCAGCTGGGTCATGCAAAGGGAAGTTGAAACAATATACACACATCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATAACAGAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATATGTGTGACGGGCGATATGATACTCCCTACCATCCTCTCTTCAGGACACTGCATACACTGCATAAGGATGATTATCATAACCCAACTTTCTCGGGTAATACTGGTGGTTGTCAACGAGAGCCATGGCATGACATGCATTCTAAAATTGATGGCCCAGCAGCTTATGATCTTCTAACTAACTTTGAGGAGCGCTGGGTAAGAGCTGCAAAGCCTCAAGGGATAAAAAAGTTTAGAAGTTCACCTGATGATTCATTGCTTAGGATACAAAGAATTCCAGATATTATCGGCATTGATGAAGCTGCTGGTGTTGGTGATGATGATCCTGAAAGTTGGCATGTTCAGATACTTCGTTCAATTGATTCAAATTCTGTTAAGGGATTTCCAAAGGAGCCAAAGGATGCATCTGCAAAGAACCTGGTATGTGGGAAGAACGTGCTGATTGACATGAGCATACATACAGCATATGTGAAGGCCATTCGCGCTGCACAACATTACATTTACATTGAGAATCAATACTTCATTGGGTCTTCATACAATTGGAGACAAAATAAGGACCTTGGTGCTAATAATTTAATTCCAATGGAAATCGCTCTAAAGGTTGCAGCAAAGATTAAAGCGAATGAGAGGTTTGCAGTGTACATCATTATTCCGATGTGGCCTGAAGGTGTTCCAACAGCAAATGCTACCCAAAGGATTCTATATTGGCAGAATAAAACAATGCAAATGATGTATGAGACAATATACAAGGCTTTGGTTGAGGCTGGGCTTGAAGATGCATTCTCTCCACAGGATTATTTGAACTTCTTTTGTCTTGGCAACCGGGAGGCCATAGATATGCGTGATAATGTTGTTTTATCCGGAACTCCTCCCCCTGCAAATAGTCCACAAGCAATTAGTCGAAACAATCGACGTTTCATGGTTTATGTCCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATAGTGGGGTCAGCAAACATCAACCAGCGCTCTATGGAAGGAACAAGGGACACTGAGATTGCAATGGGAGCCTACCAACCTGTTCATACTTGGGCAGTAAAACAATCCTATCCACACGGACAGATCCATGGATATAGGATGTCACTATGGGCAGAACACACAGGTACAATTGAAGACTGCTTCTATCAACCAGAAAGCCTGGAATGTGTGAGAAGGGTCAGAACAATGTCTGAGCTGAACTGGAGACAGTTTGCAGCAAATGAGGTGACAGAGATGAGAGGGCATCTGCTCAAATACCCTGTTGAAGTTGATAGAAAGGGCAAGGTTAAGCCACTTCCTGGCCAGGAAGAGTTCCCTGATGTGGGAGGGAAGATAGTCGGATCATTCACTGCCATTCAGGAGAATCTAACCATTTGA 3066 0.4514 MDKQGSSSSPYHYPNPRPQGPSGGAADPYNATHPPYPYPYYQPPPAPFSHYAYPVSPSSPSHSPPLGSSYPQPPQSPSTPSHSVPLGYGGPPDFNRPPPQLSYSRSQPYYPSPYHQGPSGVVSQTSDSNSNPPLEHAMGNVRLSDGRQSAPASPPAPAVQPYFGSGLRHSNSLDHSMRPAYSDMIDESVNSQSLALVPAEGRTSLRVLLLHGNLDIWVHRAINLPNLDMFHKTLGDMFGRFPGSEGAANGKNTSDPYVAITVPNAVIGRTFVIANDENPVWEQHFYLPVAHYAAEVQFVVKDNDVVGSQLIGIVAIPVEQIYSGERVEGTYPILSSNGKPCKPGAALSLSMQYIPMAKLSTYHLGVGAGPDYVGVPGTYFPLRQGGRVTLYQDAHVPDGCLPNVRLDNGMHYVNGQCWADIFDAIRQAKRLIYITGWSVWHKVRLVRDAADKSDIILGDLLRSKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLSPRLAGKRLSWVMQREVETIYTHHQKTVIVDADAGNNRRKIVAFVGGLDMCDGRYDTPYHPLFRTLHTLHKDDYHNPTFSGNTGGCQREPWHDMHSKIDGPAAYDLLTNFEERWVRAAKPQGIKKFRSSPDDSLLRIQRIPDIIGIDEAAGVGDDDPESWHVQILRSIDSNSVKGFPKEPKDASAKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWRQNKDLGANNLIPMEIALKVAAKIKANERFAVYIIIPMWPEGVPTANATQRILYWQNKTMQMMYETIYKALVEAGLEDAFSPQDYLNFFCLGNREAIDMRDNVVLSGTPPPANSPQAISRNNRRFMVYVHSKGMIVDDEYVIVGSANINQRSMEGTRDTEIAMGAYQPVHTWAVKQSYPHGQIHGYRMSLWAEHTGTIEDCFYQPESLECVRRVRTMSELNWRQFAANEVTEMRGHLLKYPVEVDRKGKVKPLPGQEEFPDVGGKIVGSFTAIQENLTI* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1858 1021 Pfam Phospholipase D C terminal 941 1011 IPR024632 -
Dod07g1858 1021 SUPERFAMILY Phospholipase D/nuclease 688 953 - -
Dod07g1858 1021 SMART C2_3c 213 330 IPR000008 -
Dod07g1858 1021 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 867 894 IPR001736 GO:0003824
Dod07g1858 1021 SMART pld_4 532 567 IPR001736 GO:0003824
Dod07g1858 1021 SMART pld_4 867 894 IPR001736 GO:0003824
Dod07g1858 1021 SUPERFAMILY Phospholipase D/nuclease 381 631 - -
Dod07g1858 1021 MobiDBLite consensus disorder prediction 58 80 - -
Dod07g1858 1021 Pfam C2 domain 212 333 IPR000008 -
Dod07g1858 1021 MobiDBLite consensus disorder prediction 1 139 - -
Dod07g1858 1021 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 210 355 IPR035892 -
Dod07g1858 1021 MobiDBLite consensus disorder prediction 32 51 - -
Dod07g1858 1021 Gene3D Endonuclease Chain A 679 925 - -
Dod07g1858 1021 PANTHER PHOSPHOLIPASE D 140 1021 IPR015679 -
Dod07g1858 1021 PANTHER PHOSPHOLIPASE D ALPHA 1 140 1021 - -
Dod07g1858 1021 MobiDBLite consensus disorder prediction 99 135 - -
Dod07g1858 1021 Pfam Phospholipase D Active site motif 870 894 IPR001736 GO:0003824
Dod07g1858 1021 Pfam Phospholipase D Active site motif 533 567 IPR001736 GO:0003824
Dod07g1858 1021 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 532 567 IPR001736 GO:0003824
Dod07g1858 1021 Gene3D C2 domain 207 341 IPR035892 -
Dod07g1858 1021 ProSiteProfiles C2 domain profile. 197 331 IPR000008 -
Dod07g1858 1021 CDD C2_plant_PLD 207 354 - -
Dod07g1858 1021 Gene3D Endonuclease Chain A 408 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1858 Dod-Chr7 48354279 48361283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1858 5 1021 Phospholipase D Gene Family (Wang group) AT2G42010 66.510 0.0 1381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1858 K01115 - gmx:100801286 1486.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1858 07 48354279 48361283 Dod07g1858 07 48354279 48361283 ECH