Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1800 ATGATACCTAAAGGGAGGACTGAAGCTAATCTCATTGAAGTTGTTGTCCGACGTGTGTTGACAAGGTTCAATCATGTGCCTGAAGTTGCTTTAAAAGGCCTGGTTGGAATTGATAAACCAATCGCAGATCTTCAGTCACTAATATTTTGCAATGGATCAGAAGATGTTCGTGTTATAGGAATTTGGGGTATTGGTGGTATTGGTAAGACAACTGTTGCCCGTGCATTATATAATATAATGTGTTCTGAATTTGAAGGTGGCTATTTTCTAGCAAATGTAAGAGAACAATTAGAAAAATATGGAATAATTAAGTTAAGAGATAAACTTCTATCCATATTAATAGAGGAAAAAGATAAAAAAATTGGCACTCATGGCATATCAACCCATTTTCTTAGGAGACTTGGCCGCAAAAAGATTCTTGTTGTTCTTGATGATGTCAATAATCCAGATGAAGTTATAAACTTAATTGGAGGACATGATTGGCTAGGTCCAAGAAGCAGAATTATCATCACAACTAGAGATAAGCATGTGATTCATAAAGAAGCAGACGATATATATGAAGTCAAGGCATTAGGATGTGATGATGCTCTAAAACTTCTTAATTTGCATGCCTTTAATAATGGAAATCACCTCCAAATGAATTGGCATAGACTTATGATGAAGGTGGTTAAATATGCTAAAGGCCTCCCATTAGCTTTGAAAGTTCTGGGTTCCTTTCTTTATGGCAAAAGTGTTGAAGAATGGGAAAGTCAGTTGCAGAAGCTTCAGAAAATGCCATTTCCAAAAATTCATGCTATTTTGAGATTGAGTTATGAAGGGTTAGATGAGGAAGAAAAGGATATATTCTTATATATTGCTTGTTTCTTCAACATAGATTGTAGGAAATATGAGGTGCAAACTTTACTAGATGCATGTGGTTACTCAACATCTATTGCTTTGAGAAATCTTCAAGATAAAGCTCTTATAAAAGTTTCTAGATACGAAAATGTATCTATGCATGACTTGATTCGAGAAATGGCTCAACAAATTGTTCGAGAACAAAATATTAAAAGACCAGGGGAACGAAATCATTTATGCAACCCGCATGACATTTATCATGTACTGAAGCATGATGAGGGGACCGAGCGTATTGAGAGTATAACTTTAGACATGTCAAGAGTTAGTGACCTGAGTTTGAAATCCTCAATCCTTTGCTGGAATGATCAATCTAAAACTCTTGAGATTTTATAA 1230 0.3512 MIPKGRTEANLIEVVVRRVLTRFNHVPEVALKGLVGIDKPIADLQSLIFCNGSEDVRVIGIWGIGGIGKTTVARALYNIMCSEFEGGYFLANVREQLEKYGIIKLRDKLLSILIEEKDKKIGTHGISTHFLRRLGRKKILVVLDDVNNPDEVINLIGGHDWLGPRSRIIITTRDKHVIHKEADDIYEVKALGCDDALKLLNLHAFNNGNHLQMNWHRLMMKVVKYAKGLPLALKVLGSFLYGKSVEEWESQLQKLQKMPFPKIHAILRLSYEGLDEEEKDIFLYIACFFNIDCRKYEVQTLLDACGYSTSIALRNLQDKALIKVSRYENVSMHDLIREMAQQIVREQNIKRPGERNHLCNPHDIYHVLKHDEGTERIESITLDMSRVSDLSLKSSILCWNDQSKTLEIL* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1800 409 Pfam NB-ARC domain 52 272 IPR002182 GO:0043531
Dod07g1800 409 SUPERFAMILY "Winged helix" DNA-binding domain 262 368 IPR036390 -
Dod07g1800 409 Gene3D - 191 275 IPR042197 -
Dod07g1800 409 PRINTS Disease resistance protein signature 226 240 - -
Dod07g1800 409 PRINTS Disease resistance protein signature 58 73 - -
Dod07g1800 409 PRINTS Disease resistance protein signature 133 147 - -
Dod07g1800 409 Gene3D - 16 187 IPR027417 -
Dod07g1800 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 285 IPR027417 -
Dod07g1800 409 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 396 IPR044974 GO:0006952
Dod07g1800 409 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 5 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1800 Dod-Chr7 46969345 46976351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1800 6 384 WRKY Transcription Factor Family AT4G12020 36.911 2.86e-60 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1800 - - ahf:112730190 495.738