Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1794 ATGCGTGTGCTGCGTGTGTTCTTCCACAAAGAAACAGCGAAAACCTCACTCACTCACTATAACCCTATTCTGTTGTGTTGTGTTGTGTTGGAACTGATATTGTTGTTGTTTTTGCAGTCGGTGACTCTGCACACAAACCTCGGCGACATCAAGTGCGAGATCTTCTGCGACGAGGTCCCCAAAACCTCCGAGAATTTTTTAGCACTATGTGCAAGTGGTTATTATGATGGGACTATATTTCACCGCAACATCAAAGGTTTCATGATTCAAGGTGGAGACCCAACTGGTACTGGCAAAGGGGGTACTAGTATATGGGGCAAGAAATTCAATGATGAGATAAGGGAATCTCTTAAGCACAATGCAAGGGGTATATTGTCAATGGCTAACAGTGGTCCAAATACTAACGGAAGTCAATTCTTCTTAGCTTATGCAAAGCAGCCACATTTGAATGGACTATATACTGTGTTTGGCAGAGTAATACATGGATTTGAAGTTCTTGATCTCATGGAGAAGACTCAAACAGGGGCTGGGGATCGTCCACTTGCAGAGATAAGGCTCAATCGAGTAACAATACATGCTAATCCACTTGCTGGTTAG 597 0.4322 MRVLRVFFHKETAKTSLTHYNPILLCCVVLELILLLFLQSVTLHTNLGDIKCEIFCDEVPKTSENFLALCASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFLAYAKQPHLNGLYTVFGRVIHGFEVLDLMEKTQTGAGDRPLAEIRLNRVTIHANPLAG* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1794 198 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 40 197 IPR044666 -
Dod07g1794 198 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 41 190 IPR002130 GO:0000413|GO:0003755
Dod07g1794 198 CDD Cyclophilin_PPIL3_like 40 191 - -
Dod07g1794 198 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 69 IPR002130 GO:0000413|GO:0003755
Dod07g1794 198 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 151 166 IPR002130 GO:0000413|GO:0003755
Dod07g1794 198 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 138 150 IPR002130 GO:0000413|GO:0003755
Dod07g1794 198 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 138 IPR002130 GO:0000413|GO:0003755
Dod07g1794 198 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 80 92 IPR002130 GO:0000413|GO:0003755
Dod07g1794 198 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 3 40 197 - -
Dod07g1794 198 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 37 191 IPR002130 GO:0000413|GO:0003755
Dod07g1794 198 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 75 92 IPR020892 GO:0003755|GO:0006457
Dod07g1794 198 SUPERFAMILY Cyclophilin-like 29 194 IPR029000 -
Dod07g1794 198 Gene3D - 38 198 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1794 Dod-Chr7 46888666 46892479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1794 41 195 U-box Gene Family AT5G67530 53.548 1.45e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1794 K12734 - gmx:100306466 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1794 07 46888666 46892479 Dod07g1794 07 46888666 46892479 ECH