Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1789 ATGGACCCAGTAGCAGCACAAGGACGTCCTCTACCACCACCTTTTCTCACTAGAGACCTTCACCTTCACCCTCACCACCAATTCCAACCACACCACAACCTCAACACCAACACCAGCAACAACCATAACACTGAAGAATTAGAGCAAAACCGTGGCCAAAAACGTGACCGTGAAGACCAAAACCCCGCCACTCCCCCCTCCGGAGGAACAGGAGACGGCAAGGAGCCGCTCTCCGGAGGCGGAGGAGAATCCGGCGAGATCGGAAGGAGACCAAGGGGAAGACCAGCAGGGTCCAAGAACAAGCCAAAACCACCCATCATCATCACTAGGGACAGTGCAAACGCGCTAAGATCTCATGTCATGGAAGTGGCCAACGGTTGTGACATCATGGAGAGCGTCACCGTCTTCGCGCGGCGGCGCCAGCGGGGGGTCTGCATCCTCAGCGGCAGCGGCACCGTCACCAACGTCACCCTCCGGCAGCCGGCTTCTCCAGGTGCTGTGGTAACCTTACATGGTAGGTTTGAGATTCTGTCCCTGTCCGGGTCATTCCTGCCGCCACCGGCTCCACCGGTGGCATCAGGACTAGCCATATACCTAGCTGGTGGACAGGGACAGGTGGTTGGAGGGAGCGTGGTGGGGCCGCTTTTGGCCGCGGGACCAGTGGTGATCATGGCGGCCTCGTTCGGCAATGCCGCCTATGAGAGGCTGCCGTTGGAGGAGGAGGAAGGGCCGGTGGCGGTGCCGGGGAGCGGCGGTGGAGGCATTAGGGTCACCAGGAGTTGTGGGGCATCAACAGCAGCAACCTCAGCATCTGCAGCAGCCACAACAGCAACAACTTGCTGGGGATCCTAA 852 0.5974 MDPVAAQGRPLPPPFLTRDLHLHPHHQFQPHHNLNTNTSNNHNTEELEQNRGQKRDREDQNPATPPSGGTGDGKEPLSGGGGESGEIGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEVANGCDIMESVTVFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPVASGLAIYLAGGQGQVVGGSVVGPLLAAGPVVIMAASFGNAAYERLPLEEEEGPVAVPGSGGGGIRVTRSCGASTAATSASAAATTATTCWGS* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1789 283 PIRSF ESCAROLA 16 282 IPR014476 GO:0003680
Dod07g1789 283 ProSiteProfiles PPC domain profile profile. 113 249 IPR005175 -
Dod07g1789 283 CDD DUF296 117 200 IPR005175 -
Dod07g1789 283 MobiDBLite consensus disorder prediction 47 61 - -
Dod07g1789 283 MobiDBLite consensus disorder prediction 26 107 - -
Dod07g1789 283 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 254 IPR014476 GO:0003680
Dod07g1789 283 Gene3D - 116 244 - -
Dod07g1789 283 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 229 IPR005175 -
Dod07g1789 283 SUPERFAMILY AF0104/ALDC/Ptd012-like 113 248 - -
Dod07g1789 283 MobiDBLite consensus disorder prediction 29 46 - -
Dod07g1789 283 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 4 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1789 Dod-Chr7 46808248 46809954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1789 1 242 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 66.929 3.86e-81 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1789 - - gmx:100816243 332.413