Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1785 ATGAGTATAAATTCTAGTTGTAGCGGAAGTACTAGTGGTGGTGGTGGAGGAAGTAGTAGCGGAGGTGGCGGTGGTGGTGGCCCTTGTGGCGCGTGCAAGTTCTTGAGAAGGAAGTGCGTGCCGGGTTGTATCTTTGCACCATACTTTGATTCGGAGCAAGGTGCTGCACACTTTGCAGCGGTGCACAAGGTCTTTGGTGCAAGCAACGTGTCCAAGCTTCTCCTCAACATTCCAGTGCACAAGAGGCTTGATGCTGTGGTCACCATTTGTTATGAAGCACAAGCAAGGCTTAGGGACCCTGTGTATGGTTGTGTTGCTCACATCTTTGCTCTACAACAACAGGTAGTGGGTTTACAAGCAGAACTCTCCTATTTACAAGGCCACCTTGCCACCCTAGAGTTACCCCATCCTCCTCCACCGCAACCCCCTTCTTCACCGCAAGCTACCGCCCCTCCGGTGCTCTCAATCTCTGACCTCCCATCTGCCGATACCACCACCACCACCGTCCCGACCACATATGATTTATCCACCCTCTTTGAGACCACCATAGCCCAAACTTCATGGCCCATGCAGCACAGGCCCATAGACCCTCGTCAATTTTTGGGTAGTGGCACATCATCATCATCAGCACCTAGCAGTGGTGGTGGTGGTGATCTTCAAGCATTGGCTCGTGAGCTTTTGCGTAGACATGGATCTTCCCCTTCAGCTCCTGTCATCAATGCACCCTCAACACATTCCCCTCCAAGATGA 750 0.5213 MSINSSCSGSTSGGGGGSSSGGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVGLQAELSYLQGHLATLELPHPPPPQPPSSPQATAPPVLSISDLPSADTTTTTVPTTYDLSTLFETTIAQTSWPMQHRPIDPRQFLGSGTSSSSAPSSGGGGDLQALARELLRRHGSSPSAPVINAPSTHSPPR* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1785 249 MobiDBLite consensus disorder prediction 1 24 - -
Dod07g1785 249 MobiDBLite consensus disorder prediction 133 169 - -
Dod07g1785 249 MobiDBLite consensus disorder prediction 188 249 - -
Dod07g1785 249 MobiDBLite consensus disorder prediction 200 215 - -
Dod07g1785 249 Pfam Lateral organ boundaries (LOB) domain 28 126 IPR004883 -
Dod07g1785 249 MobiDBLite consensus disorder prediction 150 169 - -
Dod07g1785 249 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 231 - -
Dod07g1785 249 ProSiteProfiles LOB domain profile. 27 129 IPR004883 -
Dod07g1785 249 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 231 - -
Dod07g1785 249 MobiDBLite consensus disorder prediction 133 149 - -
Dod07g1785 249 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1785 Dod-Chr7 46746884 46751364 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1785 28 243 AS2 family AT2G45420 64.286 6.24e-82 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod07g1785 LOB 3.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1785 K21994 - mnt:21405253 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0874 01 16045652 16049848 Dod07g1785 07 46746884 46751364 PCT