Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1784 ATGGATTGTGGAGGCAAGATTGGTGGGAGCAGTGAAAGAGGTGGGCCTTGTGGTGCCTGCAAGTTCCTGAGGAGGAAGTGTGTGAAGGGTTGCATATTTGCACCATACTTCGACTCTGACCAAGGAACTGCTCATTTTGCTGCGGTGCACAAGGTGTTTGGTGCAAGCAATGCCGCTAAGCTACTCATGAGGATCCCAGCTCACAAGCGCCTTGATGCTGTTGTCACTCTTTGCTATGAGGCTCTGGCTAGGGCTAGAGACCCAGTTTATGGCTGTGTTGGTCACATCTTTGCTCTTCAGCAGCAGGTTGTGAACTTGCAGGCAGAATTAACATATGTTCAAGCCCGTCTTGCCACAATGCATCGCATCCCTGTAGCTGCTCCTTTTCCACACCCTTCAATCTCTTCTACACCAACAAGTTTTCATTCCCCCTTAGACAACTTGGTATCAAATGCTGACTTGCAAAGTGCCTCTAACATAACCATGAACTATGACCCTTTCCAGCCACATTCAACATCACTAGAACTAAGCAGCTATATCAACCCATCAGACCAGCAACTCGAGGATGGTGGTCTTCAAGCTTTGGCTCGAGAGTTTGTGTCTAGGTACTTTCCTGGAGTAAGATTCCAGCCAGCTAATTCCCACTAA 648 0.4815 MDCGGKIGGSSERGGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNAAKLLMRIPAHKRLDAVVTLCYEALARARDPVYGCVGHIFALQQQVVNLQAELTYVQARLATMHRIPVAAPFPHPSISSTPTSFHSPLDNLVSNADLQSASNITMNYDPFQPHSTSLELSSYINPSDQQLEDGGLQALAREFVSRYFPGVRFQPANSH* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1784 215 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 11 205 - -
Dod07g1784 215 ProSiteProfiles LOB domain profile. 15 117 IPR004883 -
Dod07g1784 215 PANTHER LOB DOMAIN CONTAINING PROTEIN 11 205 - -
Dod07g1784 215 Pfam Lateral organ boundaries (LOB) domain 16 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1784 Dod-Chr7 46723268 46727949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1784 8 213 AS2 family AT4G00210 51.152 8.03e-71 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod07g1784 LOB 1.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1784 - - gmx:100791377 335.109