Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1782 ATGGAAGCAAGAGAAGGCATTAGTTCTGGGGTTACAGTGATAGGGGCAGAAACTCCATCAGCATATCATGTGGCACCAAGGAGTGAAGCTCCAAACCAGGTTCATGTCCCTGAAGCAGCGGCGGCCGCCGCCGCCACCGCCACTGCTGGTGTTGGTGTCTCTCCGGTGAGCACGGTGATGGATGGGACGGCAGTTAAGAAGAAGAGGGGTAGACCAAGGAAGTATGGTCCAGATGGGTCTGTCACCATGGCATTGTCCCCATTGCCAATCTCATCTTCAGCTCCACCTTTGAATGACTTTTCTCATTCGTCTGGGAAGCGGGGGAAGCCACGGGGGATGGAATACAAGCAGTCGAAAAAATTCGGGTTGGATCATCCAGGTGACTTATGCTCTGATGGTACAAACTTTATGCCACATATCATAACTGTCAATGCTGGAGAGGACATAACAATGAAGGTTATATCCTTTTCTCAGCAAGGACCCCGAGCTATATGCATCTTATCCGCTAATGGTGTAATTTCAAATGTGACACTTCGTCAGCCTGATTCTTCTGGGGGCACTTTGACCTATGAGGGCCGTTTTGAGATACTTTCCTTGTCTGGATCATTCATGCCTACTGACAACCAAGGAACCAGAAGCAGGACGGGTGGCATGAGTGTGTCGTTGGCAAGCCCTGATGGTCGCGTTGTTGGTGGTGGTGTTGCTGGCCTTCTCATAGCTGCTAGTCCGGTGCAGGTGGTGGTGGGAAGTTTCCTACCAAGCAACCAGCAAGATCAGAAACCAAAGAAGCCAAAGTCTGATTATGCACAAACCACAGTTACTCAAGGCTTTGCAGTTTCCTCTGCACCACCCCCAAATAATGCTGCTGAAAAAGATGATGTCATAGGTGGTGGACATGTGATGCAAAACTCTGGAACGCTTAACTCGACAAGCCTTAACCCTCCCTCAACTTTCAGAAGAGATAATTGGGTCAACATGCACTCCATGCAAGACTCAAGAAAGTCAGCCACTGACATCAACATATCTTTGCCTGATAGTTAA 1041 0.4899 MEAREGISSGVTVIGAETPSAYHVAPRSEAPNQVHVPEAAAAAAATATAGVGVSPVSTVMDGTAVKKKRGRPRKYGPDGSVTMALSPLPISSSAPPLNDFSHSSGKRGKPRGMEYKQSKKFGLDHPGDLCSDGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRTGGMSVSLASPDGRVVGGGVAGLLIAASPVQVVVGSFLPSNQQDQKPKKPKSDYAQTTVTQGFAVSSAPPPNNAAEKDDVIGGGHVMQNSGTLNSTSLNPPSTFRRDNWVNMHSMQDSRKSATDINISLPDS* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1782 346 Pfam Plants and Prokaryotes Conserved (PCC) domain 138 251 IPR005175 -
Dod07g1782 346 Gene3D - 138 275 - -
Dod07g1782 346 MobiDBLite consensus disorder prediction 301 316 - -
Dod07g1782 346 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 255 - -
Dod07g1782 346 ProSiteProfiles PPC domain profile profile. 133 274 IPR005175 -
Dod07g1782 346 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 345 - -
Dod07g1782 346 MobiDBLite consensus disorder prediction 65 112 - -
Dod07g1782 346 CDD DUF296 138 251 IPR005175 -
Dod07g1782 346 MobiDBLite consensus disorder prediction 85 100 - -
Dod07g1782 346 MobiDBLite consensus disorder prediction 277 316 - -
Dod07g1782 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 345 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1782 Dod-Chr7 46678408 46684503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1782 10 282 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 58.609 2.91e-99 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1782 - - gmx:100793726 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0876 01 16081266 16084874 Dod07g1782 07 46678408 46684503 PCT