Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1730 ATGGCATCAACACGCTTACTCTTCAATCTTCTCATTGTACCCTTCATATTTTCCTCTTTAGTTTCTTGTTATTCTTTGAATAATGACATTAAACTTTGGTGTAGCCAAACCCCGAATCCTCAACCATGTGAGTATTTCTTGAGCAATAACCCCACTCACCAACACAAACCCATCAACCAAAAATCCGATTTCTTCAAGCTTTCATTGCAACTTGCTCAAGAGAGAGCACTCATTGGCCATGCCAACACTCTTTCATTAGGCTCAAAGTGCCGTAACCCACTTGAAACAGCTGCTTGGGCTGATTGTGTTGAGCTTTATGAGCAAACCATCAAAAAGCTTAACAAAACCTTAGACCCTAACACAAAGTGCACCCAACTTGACACCCAAACATGGCTTAGCACAGCTCTCACCAACCTCGAGACATGCAAAGCTGGGTTCTATGAACTTGGGGTGCAAGACTATGTGCTTCCTTTAATGTCCAACAATGTTACCAAGTTACTAAGCAACACTTTGGCTCTTAACAAGGTTGAGTATCAAGAACCAAGTTACAAAGATGGGTTCCCAACGTGGGTCAAGCCAGGTGACAGAAAGCTGCTACAAACATCTTCTCCAGCATCTCAGGCTAATGTAGTGGTGGCCAAAGATGGATCAGGAAAGTACACAACGGTGAGTGCAGCCATAAATGCTGCACCAAAGAGTAGCAGTGGAAGGTATGTGATATATGTGAAGGCAGGGATATACAATGAGCAGGTTGAGATAAAGGCAAAGAATATCATGTTGGTAGGAGATGGTATTGGAAAGACCATAATCACAGGCAGCCAAAGTGTTGGAGGAGGCACCACAACCTTCAACTCAGCCACTGTTGGTAAGCAAGCTAATCAAACTGTTTCCTAA 894 0.4318 MASTRLLFNLLIVPFIFSSLVSCYSLNNDIKLWCSQTPNPQPCEYFLSNNPTHQHKPINQKSDFFKLSLQLAQERALIGHANTLSLGSKCRNPLETAAWADCVELYEQTIKKLNKTLDPNTKCTQLDTQTWLSTALTNLETCKAGFYELGVQDYVLPLMSNNVTKLLSNTLALNKVEYQEPSYKDGFPTWVKPGDRKLLQTSSPASQANVVVAKDGSGKYTTVSAAINAAPKSSSGRYVIYVKAGIYNEQVEIKAKNIMLVGDGIGKTIITGSQSVGGGTTTFNSATVGKQANQTVS* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1730 297 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 176 IPR035513 -
Dod07g1730 297 PANTHER PECTINESTERASE 4 289 - -
Dod07g1730 297 Pfam Pectinesterase 209 294 IPR000070 GO:0030599|GO:0042545
Dod07g1730 297 SUPERFAMILY Pectin lyase-like 203 293 IPR011050 -
Dod07g1730 297 Pfam Plant invertase/pectin methylesterase inhibitor 29 173 IPR006501 GO:0004857
Dod07g1730 297 CDD PMEI-like_3 32 175 - -
Dod07g1730 297 Gene3D - 204 297 IPR012334 -
Dod07g1730 297 SMART PMEI_2 25 173 IPR006501 GO:0004857
Dod07g1730 297 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 175 IPR006501 GO:0004857
Dod07g1730 297 ProSitePatterns Pectinesterase signature 1. 234 253 IPR018040 -
Dod07g1730 297 PANTHER PECTINESTERASE 4 289 - -
Dod07g1730 297 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 176 IPR035513 -
Dod07g1730 297 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1730 Dod-Chr7 45937175 45938068 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1730 1 288 Carbohydrate Esterase AT2G45220 60.208 1.50e-123 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1730 K01051 - gmx:100781697 495.352