Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1729 ATGGATACTTTTCTTCGCCTACCCATCATCCCACTTTTATCCGTTTTCTTCATATTTTCCTCTCTAGCTTCTGGCTATTCTTTGAATGACATTAAGCTTTGGTGTAGCCAAACCCCAAATCCTCAGCCATGTGAGTATTTCTTGAGCAATAACTCCACTCAGCAAAACAAACCCATCAACCAAAAAGCCGATTTCCTCAAGATTTCATTGCAACTTGCTCAAGAGAGAGCACTGATAGGCCATGCCAACACTCTTTCATTAGGCTCAAAGTGCCGTAACCCACAAGAAACAGCTGCTTGGGCTGATTGTGTTGAGCTTTATGAGCAAACCATCAGAAAGCTCAACAAAACCTTAGACCCCAACACCAAGTGCACCCAAGTTGATACCCAAACATGGCTTAGCACAGCTCTCACCAACCTGGAGACATGCAAAGCTGGGTTCTATGAACTTGGGGTGCAAGACTATGTGCTTCCTCTAATGTCCAACAATGTTACCAACTTACTAAGCAACACTTTGGCTCTTAACAAGGTTGAGTATCAAGAGCCAAGTTACAAGGATGGGTTCCCAACATGGGTCAAGCCAGGAGACAGAAAGCTGCTCCAAACATCTTCTCCTGCTTCTCAGGCTAATGTAGTGGTGGCCAAAGATGGATCAGGAAAGTACACTACGGTGAGTGCTGCCATAAATGCTGCACCAAAGAATAGCAATGGAAGATATGTGATACATGTGAAGGCAGGGATATACAATGAGCAGGTTGAGATAAAGGCAAAGAATATCATGTTGGTAGGAGATGGTATTGGAAAGACCATAATCACAGGCAGCCAAAGTGTTGGGGGAGGCACCACAACCTTCCGTTCAGCCACTGTTGCTGTTACAGGAGATGGATTTATTGCTCAAGGCATCACATTTAGGAACACTGCTGGTGCAGCAAAACACCAAGCTGTTGCACTGCGTTCTGGATCAGACTTATCAGTATTTTACAGATGCAGCTTTGAAGGTTACCAAGACACATTGTATGTTTACTCTGACAGGCAATTCTACAGGGAGTGTGATATTTATGGCACAGTGGACTTCATCTTTGGCAATGCTGCTGTGGTGTTCCAAAATTGCAACCTCTTTGCAAGGAACCCTCCAAACAAAGTGAACACAATCACTGCACAAGGCAGGACAGAGCCAAACCAAAACACTGGTATTTCCATCCAGAATTCAGTTGTTACAGCTGCATCAGATTTGAAACCAGTTCAAGGCTCAGTTAAGACTTATCTTGGAAGGCCATGGAAACAATACTCAAGAACTGTTTTCATGAAGAGTTCTCTTGATAGCTTGATTAATCCAGCTGGCTGGTTGGAATGGAGTGGTAACTTTGCATTAAGCACTTTGTACTATGGAGAGTACATGAACACCGGACCAGGATCTTCAACTGCAAATAGAGTTAAATGGCCTGGTTACCATGTCATTACAAGTGCTTCTGAGGCCTCAAAATTCACAGTTGCAAATTTCATTGCTGGCAATTCTTGGTTACCATCCACCAATGTGCCCTTTGCCGCTAGCTTATAA 1557 0.4374 MDTFLRLPIIPLLSVFFIFSSLASGYSLNDIKLWCSQTPNPQPCEYFLSNNSTQQNKPINQKADFLKISLQLAQERALIGHANTLSLGSKCRNPQETAAWADCVELYEQTIRKLNKTLDPNTKCTQVDTQTWLSTALTNLETCKAGFYELGVQDYVLPLMSNNVTNLLSNTLALNKVEYQEPSYKDGFPTWVKPGDRKLLQTSSPASQANVVVAKDGSGKYTTVSAAINAAPKNSNGRYVIHVKAGIYNEQVEIKAKNIMLVGDGIGKTIITGSQSVGGGTTTFRSATVAVTGDGFIAQGITFRNTAGAAKHQAVALRSGSDLSVFYRCSFEGYQDTLYVYSDRQFYRECDIYGTVDFIFGNAAVVFQNCNLFARNPPNKVNTITAQGRTEPNQNTGISIQNSVVTAASDLKPVQGSVKTYLGRPWKQYSRTVFMKSSLDSLINPAGWLEWSGNFALSTLYYGEYMNTGPGSSTANRVKWPGYHVITSASEASKFTVANFIAGNSWLPSTNVPFAASL* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1729 518 Gene3D - 205 518 IPR012334 -
Dod07g1729 518 SUPERFAMILY Pectin lyase-like 204 515 IPR011050 -
Dod07g1729 518 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 177 IPR035513 -
Dod07g1729 518 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 177 IPR035513 -
Dod07g1729 518 Pfam Plant invertase/pectin methylesterase inhibitor 30 174 IPR006501 GO:0004857
Dod07g1729 518 PANTHER PECTINESTERASE 10 516 - -
Dod07g1729 518 ProSitePatterns Pectinesterase signature 2. 352 361 IPR033131 -
Dod07g1729 518 SMART complete 243 420 IPR006633 -
Dod07g1729 518 Pfam Pectinesterase 210 504 IPR000070 GO:0030599|GO:0042545
Dod07g1729 518 PANTHER PECTINESTERASE 10 516 - -
Dod07g1729 518 SMART PMEI_2 26 174 IPR006501 GO:0004857
Dod07g1729 518 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 176 IPR006501 GO:0004857
Dod07g1729 518 CDD PMEI-like_3 33 176 - -
Dod07g1729 518 ProSitePatterns Pectinesterase signature 1. 235 254 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1729 Dod-Chr7 45930286 45932279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1729 5 518 Carbohydrate Esterase AT2G45220 67.184 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1729 K01051 - gmx:100783428 884.789