Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1721 ATGTCCGCCTCATCCACTTCCTTTTCACCGGACCAGCACCTCTCTCCCTCCGACCAGCTCTGCTATGTCCAATGTAACTTCTGTGACACTGTCCTCGCGGTGAGTGTTCCTTGCACCAGTTTGTTCAAGACTGTGACTGTGAGATGCGGTCATTGCACCAACCTTCTCTCAGTCAACATGAGGCTGCTTCTCCCTTCTGCCAATCAGCTCCACCTTGGCCACACTTGCTTCACTCCTCAAAATCTTCTGGAGGAGATTCGAAATGCACCTTCATCAAACATGATGATGAATCAGCTCCCAAACCCAAATGATTTGGTCATGAGCACCATTAGAGGAGGGCCTGAAGAAATCCCTAAGCCTCCGCCAGCTAACAGACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGATGAGATCCAACGTATCAAGGCTGGGAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCAGCTGCAAAGAATTGGGCCCATTTTCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTTCGCCAGGAAGCTGAGGACGTGCTTATGAAAGATGGGTTTTTCGCACCGGCAAATGTAGGTGTCTCTCCCTACTAG 645 0.493 MSASSTSFSPDQHLSPSDQLCYVQCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRLLLPSANQLHLGHTCFTPQNLLEEIRNAPSSNMMMNQLPNPNDLVMSTIRGGPEEIPKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEAEDVLMKDGFFAPANVGVSPY* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1721 214 PANTHER PROTEIN YABBY 4 1 212 - -
Dod07g1721 214 Pfam YABBY protein 16 178 IPR006780 GO:0007275
Dod07g1721 214 MobiDBLite consensus disorder prediction 112 132 - -
Dod07g1721 214 Gene3D High mobility group box domain 118 196 IPR036910 -
Dod07g1721 214 SUPERFAMILY HMG-box 123 172 IPR036910 -
Dod07g1721 214 PANTHER PROTEIN YABBY 6-RELATED 1 212 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1721 Dod-Chr7 45804993 45808285 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1721 27 212 C2C2-YABBY Transcription Factor Family AT4G00180 64.115 4.86e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Dod07g1721 YABBY 8.2e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1721 K25796 - gmx:100781267 404.831