Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1717 ATGTTCAATATTTCTTCTTCTCCTCCACATGTTCCTCGCTGGCTCCAAGTCCTCCTCCGAGAGAAGTTCTACAACGCCTGCATAATTCATGAAGAGGCCAAAAAGAATGAGAAGAACGTGTATTGTTTGGACTGTTGCATCAGCCTCTGCCCTCACTGCTTGTCCCCTCACCGCTCTCACAGACTCTTACAGATTAGAAGGTATGTGTACCACGATGTTATAAGGTTGGATGATATTGGGAAATTGGTTGACTGCACTTCTGTTCAATCCTACACGACCAACAGTGCAAAAGTGATCAACTACCTCATTGGAACAAGGGGTGGTCTCTCTGGCTACCTGTTCGAGTGCAACTACCTGCCCTTGCCTGAACCCGGCTTCGACGAGTGTCTTATGACCCCTGACTCGGTTCTCGAACTGGCCGGTTCGGTTCGAACTTCGTCCGGTTCAGGTGGCTGTGGTGGGGTGGATTGTAAGGCCACTCTTGTTTGCACTGCCACCACTGAAGTTGTGAGAAAGAAAAGGACTTCCGGTTCGGCTTGCCGACCGGTCGGACCAGCATGTCTACCGGTTTCTGAAATTTCTGTCGGTCTTATGAACCGTAGGAAAGGGACCCCACATAGGGCCCCACTTTATTGA 636 0.5 MFNISSSPPHVPRWLQVLLREKFYNACIIHEEAKKNEKNVYCLDCCISLCPHCLSPHRSHRLLQIRRYVYHDVIRLDDIGKLVDCTSVQSYTTNSAKVINYLIGTRGGLSGYLFECNYLPLPEPGFDECLMTPDSVLELAGSVRTSSGSGGCGGVDCKATLVCTATTEVVRKKRTSGSACRPVGPACLPVSEISVGLMNRRKGTPHRAPLY* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1717 211 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Dod07g1717 211 PANTHER BNAC04G22060D PROTEIN 9 99 - -
Dod07g1717 211 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 99 - -
Dod07g1717 211 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 102 211 - -
Dod07g1717 211 Pfam PLATZ transcription factor 66 99 IPR006734 -
Dod07g1717 211 PANTHER BNAC04G22060D PROTEIN 102 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1717 Dod-Chr7 45525943 45528535 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Dod07g1717 PLATZ 3.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1717 - - pvu:PHAVU_008G142900g 328.946