Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1705 ATGGAAGATTCTAAGTTGCACGGTATAGTGGGAGACATTGATCAGGATTTGGATCTCTCTGTATGCAGAATAAAACCAAGAGGATTTAAAGTGGGAACGAAAAAGGTGAATCGAAGGAAGTTTTCGAAGTTTGTCAGCTGCTCTTGCCATCAAAAAGGTTGCAAACAGCCAAGCACTTCATCTGCATCTTCAAGTGATCAAGATGACAACCCTTCAAACCCGTGCCATGCCATCTTCATATTTCTGGATCCACTGCTCCTTGCTGTGCTCCAAGTTGAGTATCAAAACAAGGAAGAATCGCCCTTTGACACGCACCCTATTCAGAAGCAGACCTTCTTGGTGGCCATATGCATCTACAGCGCGCTACTTGGAATCAAGATCCAAAATACACTGCCTCGAAGACGTGGCTTCCTGGATCAGAGTCTAAGCTTTGTCCTTCTAGTTTCTGGATCAGTTTCTTCTGGAGCCCTATTCTCCTTCTTGTTGGATGGAGTTCTGTTATGGCTTGTGCTCATCATCTTGGGATCTATACCAATAATATTGGGTCGTCACTTGCTCAAAAATTCAGTGCATTGGATATTAGGATTGGCGGCGAAATTAGATCTTCAGACCAAGTTTTCAACCATGATCTCAATATTCCACAGGAAGGCACCGGCACAAAACAAATTAAACGTAAGAAGACACTATGGAGGAGTGAGGCATTGGCCATGGGGAAAATGGGCAGCAGAGATCCGTGATCCAAAGAAGACAGCGAAGGTGTGGCTTGGAACCTTTGAAACTGCTGAGGCTGCTGCCGCTGCTGCACTTGCCTATGACGAAGCAGTTTTTGGTCTCTCAATGGACGAAATTTGGCGAGAAAACGACCAGGGAAAAAAACACTATGGAGGAGTGAGGCATTGGCCATGGGGAAAATGGGCAGCAGAGATCCGTGATGCAAAGAAGACAGCGAAGGTGTGGCTTGGAACCTTTGAAACTGCTGAGGCTGCTGCTGCTGCTGCACTTGCCTATGACGAAGCAGTTTTTGGTCTCTCAACATGGAGAAAATATGGACAGAAAGTCACAAGAGACCAGGGAAAAAA 1079 0.4578 MEDSKLHGIVGDIDQDLDLSVCRIKPRGFKVGTKKVNRRKFSKFVSCSCHQKGCKQPSTSSASSSDQDDNPSNPCHAIFIFLDPLLLAVLQVEYQNKEESPFDTHPIQKQTFLVAICIYSALLGIKIQNTLPRRRGFLDQSLSFVLLVSGSVSSGALFSFLLDGVLLWLVLIILGSIPIILGRHLLKNSVHWILGLAAKLDLQTKFSTMISIFHRKAPAQNKLNVRRHYGGVRHWPWGKWAAEIRDPKKTAKVWLGTFETAEAAAAAALAYDEAVFGLSMDEIWRENDQGKKHYGGVRHWPWGKWAAEIRDAKKTAKVWLGTFETAEAAAAAALAYDEAVFGLSTWRKYGQKVTRDQGK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1705 359 PANTHER DNA-BINDING DOMAIN 290 339 IPR044808 GO:0003700|GO:0009873
Dod07g1705 359 SUPERFAMILY DNA-binding domain 228 276 IPR016177 GO:0003677
Dod07g1705 359 PRINTS Ethylene responsive element binding protein signature 251 267 IPR001471 GO:0003700|GO:0006355
Dod07g1705 359 PRINTS Ethylene responsive element binding protein signature 229 240 IPR001471 GO:0003700|GO:0006355
Dod07g1705 359 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109-LIKE 79 274 - -
Dod07g1705 359 SUPERFAMILY DNA-binding domain 293 343 IPR016177 GO:0003677
Dod07g1705 359 Pfam AP2 domain 228 275 IPR001471 GO:0003700|GO:0006355
Dod07g1705 359 Pfam AP2 domain 293 340 IPR001471 GO:0003700|GO:0006355
Dod07g1705 359 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109-LIKE 290 339 - -
Dod07g1705 359 Gene3D AP2/ERF domain 292 349 IPR036955 GO:0003700|GO:0006355
Dod07g1705 359 Gene3D AP2/ERF domain 227 289 IPR036955 GO:0003700|GO:0006355
Dod07g1705 359 ProSiteProfiles AP2/ERF domain profile. 293 332 IPR001471 GO:0003700|GO:0006355
Dod07g1705 359 ProSiteProfiles AP2/ERF domain profile. 228 267 IPR001471 GO:0003700|GO:0006355
Dod07g1705 359 MobiDBLite consensus disorder prediction 51 70 - -
Dod07g1705 359 PANTHER DNA-BINDING DOMAIN 79 274 IPR044808 GO:0003700|GO:0009873
Dod07g1705 359 SMART rav1_2 228 282 IPR001471 GO:0003700|GO:0006355
Dod07g1705 359 SMART rav1_2 293 351 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1705 Dod-Chr7 45091905 45094582 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1705 288 341 AP2-EREBP Transcription Factor Family AT5G61890 70.175 3.79e-18 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Dod07g1705 AP2 2.1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1705 - - mtr:MTR_4g027195 137.117