Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1693 ATGGCTTTGATTGTGGATCAACAATCAAACTTCAAACACTTTTGTAAAATTTGCAAAAAAGGCTTTGGTTGTGGAAGAGCTCTAGGAGGACACATGAGGGCACATGGCATAGGAGATGAAACTGGGCACATGGATGATGATGACCCTGCAAGTGATTGGGAAGATAGGCTTGGTGGCAATGTTCCACCAAGCAACAAACGCATGTATGCCTTAAGGACAAACCCAAATAGGTTAAAGAGCTGTAGGGTTTGTGAGAATTGCGGCAAGGAGTTCTCGTCTTGGAAATCTTTCCTTGAGCATGGAAAATGCACCTCCGAGGACGCCGAGTCCCTTGTCTCCTCTCCAGGATCCGATGTCGCTGATGACGGCATAGGAGGCCAGAGAGGATGCGGTTGGTCCAAAAGGAAAAGGTCATTGAGAGCCAAAGTTGGTAGCTTCAACTACAATTGCCCTTCAAGCGAGGAAGAAGACCTAGCAAATTGTTTGATGATGTTGTCCAATGCCATTGTTGACCCTCTTGTAGCCGAGCCAGAAGAGTCTTGTGCCTCAGCTAGCAAAGATGAGGAAAGAAGAAACTCCATGAATTTCATTGCACCATTCTCATCATACAAAGTCCCTATGGATAACAACAACAAGGCCAAAGGGGTTGCAAAGGGCTTGTTTGAATGCAAAGCATGCAAGAAGGTGTTCAATTCACACCAAGCATTGGGTGGCCATAGAGCTAGCCACAAGAAAGTTAAGGGTTGCTTTGCTGCAAGACTAGACAACCTTGAAGACAACCTGGTGGATGATGATGTCATCACACATGAAGAGTTCTTCCCTACAAAATCAAACTCCACCCTCCAATTTGATCATCATCATCATCATGGCTCCACCACATTGGCCTCTTCATCCAAGAGGAAATCAAAGGTTCATGAGTGTTCCATATGCCATAGGAGCTTCTCTTCGGGACAAGCATTAGGGGGTCACAAGAGATGCCATTGGATCACATCAAATGCACCCGCGGACACTTCAACATTGGCTAGATTTCAACAATTTCAGGAACATTTGGATCAAATACCAAAGTTTGATGGATCTTCTGAGCCACTTGAACTCAAGCTAGATCTTAACCTTCCTGCACCAACCAATGACCTTGCTAGAAGGAACAATGTGTCCACAGAAATTTTCTTGCAACCATGGGTTGGAACAAAGGACAACATTGTTAAAGATGATAATAATAGCCAGTGTCAGAGTCATCACAACCACAACCACCAAAACCAAATTGATCATGATGACAATATTATGGATGAGGACAAAAATAATAACCCCGGGAATAATGCTTTGATGCAAAATGTGGATAATGAAGCTGATAGTAAGATCAAGTTAGCAAAACTTAGTGAGCTAAAGGACATGAACATTGGTGGCAGTTCTTCCCCATGGTTGCAGGTTGGAATTGGTTCAACAACTGATGTTGGGTCCGAGCACTGA 1467 0.4397 MALIVDQQSNFKHFCKICKKGFGCGRALGGHMRAHGIGDETGHMDDDDPASDWEDRLGGNVPPSNKRMYALRTNPNRLKSCRVCENCGKEFSSWKSFLEHGKCTSEDAESLVSSPGSDVADDGIGGQRGCGWSKRKRSLRAKVGSFNYNCPSSEEEDLANCLMMLSNAIVDPLVAEPEESCASASKDEERRNSMNFIAPFSSYKVPMDNNNKAKGVAKGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNLEDNLVDDDVITHEEFFPTKSNSTLQFDHHHHHGSTTLASSSKRKSKVHECSICHRSFSSGQALGGHKRCHWITSNAPADTSTLARFQQFQEHLDQIPKFDGSSEPLELKLDLNLPAPTNDLARRNNVSTEIFLQPWVGTKDNIVKDDNNSQCQSHHNHNHQNQIDHDDNIMDEDKNNNPGNNALMQNVDNEADSKIKLAKLSELKDMNIGGSSSPWLQVGIGSTTDVGSEH* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1693 488 ProSitePatterns Zinc finger C2H2 type domain signature. 223 243 IPR013087 -
Dod07g1693 488 Gene3D Classic Zinc Finger 11 103 - -
Dod07g1693 488 SUPERFAMILY beta-beta-alpha zinc fingers 13 101 IPR036236 -
Dod07g1693 488 MobiDBLite consensus disorder prediction 416 431 - -
Dod07g1693 488 PANTHER OS02G0659100 PROTEIN 1 486 - -
Dod07g1693 488 Pfam C2H2-type zinc finger 221 245 - -
Dod07g1693 488 Pfam C2H2-type zinc finger 304 329 - -
Dod07g1693 488 Pfam C2H2-type zinc finger 13 35 - -
Dod07g1693 488 ProSiteProfiles Zinc finger C2H2 type domain profile. 305 327 IPR013087 -
Dod07g1693 488 SUPERFAMILY beta-beta-alpha zinc fingers 302 328 IPR036236 -
Dod07g1693 488 MobiDBLite consensus disorder prediction 39 60 - -
Dod07g1693 488 ProSiteProfiles Zinc finger C2H2 type domain profile. 221 248 IPR013087 -
Dod07g1693 488 MobiDBLite consensus disorder prediction 469 488 - -
Dod07g1693 488 ProSitePatterns Zinc finger C2H2 type domain signature. 307 327 IPR013087 -
Dod07g1693 488 MobiDBLite consensus disorder prediction 406 443 - -
Dod07g1693 488 ProSitePatterns Zinc finger C2H2 type domain signature. 15 35 IPR013087 -
Dod07g1693 488 MobiDBLite consensus disorder prediction 39 54 - -
Dod07g1693 488 SMART c2h2final6 82 102 IPR013087 -
Dod07g1693 488 SMART c2h2final6 221 243 IPR013087 -
Dod07g1693 488 SMART c2h2final6 13 35 IPR013087 -
Dod07g1693 488 SMART c2h2final6 305 327 IPR013087 -
Dod07g1693 488 PANTHER OS02G0659100 PROTEIN 1 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1693 Dod-Chr7 44853137 44854603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1693 134 371 C2H2 Transcription Factor Family AT1G02040 35.802 4.16e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod07g1693 zf-C2H2_6 1.6e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1693 - - ahf:112720137 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1693 07 44853137 44854603 Dod07g1693 07 44853137 44854603 ECH