Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1692 ATGACTTCTAACCGTGGGAGTACCATCCATGAAAATATGTTAGTATATATACCACTAGCATGTACTGGGGCAGAATTATATTGCATAAACGCAATTAGTCCCAAGCTATCAACGTTGTATTTTGCAAATCCCATCATGGACATTTTCAAGTTGACTCCTGTAATATTCGGTTATTCTATGTTCTTAAACCCATGCATTTGCATCAACCTCAAATTGTTCAATGCTTCCAAAATTCAGAATGAGGAACAATGGCAAACAACAATAGCTACATGGTACGGAGCACCAGACGGTGCTGGAACAGACGGAGGTGCTTGTGGATATGGTAACACTCTGGAAAATCTTCCACTCTCTAAAATGATATCAGCTGGGGGCCTTCTCTTTTCAGTCATGGCAAAGGATGCGGTGAAATGCACAGATAAAGCTGCATGCTCAGGAAATCCAGTCACTGTGATGACAACTGATGAATGCCCTGGTTGTCCACCACTACAGTTCGATCTCAGCGGCACTGCTTTTGGTTCAATGGCAAATTCTGGGCAAGCAGATAATCTTCGGAACTATGGACAAATAAATGTTCAATTCAAAAGGGTTGCATGCTCCTTTGGGCTATCTATAGCCTTCACCATCGATAGTGGGGCAAACCCATACTACTTTGCAACCGAAGTTGAGTATGAAAATGGGGATGAAGACCTTGTGGAGATAAAATTGAAGCAAGACCATGTATCAGAAACATGGCTTCCAATGCAACGTTCTTGGGGTGCAAGATGGGCCTTATCCTCAACTTCTGCGCTGCAACCTCCATTCTCCATTATGCTCACACAGGCTCAGGAGGGCACCAACAAGACCATTGTGGCTGACAGTGTCATCCCAATTAACTGGCAACCTGGCCAAGTTTATCGATCAGTGGTTAATTTCTAG 915 0.435 MTSNRGSTIHENMLVYIPLACTGAELYCINAISPKLSTLYFANPIMDIFKLTPVIFGYSMFLNPCICINLKLFNASKIQNEEQWQTTIATWYGAPDGAGTDGGACGYGNTLENLPLSKMISAGGLLFSVMAKDAVKCTDKAACSGNPVTVMTTDECPGCPPLQFDLSGTAFGSMANSGQADNLRNYGQINVQFKRVACSFGLSIAFTIDSGANPYYFATEVEYENGDEDLVEIKLKQDHVSETWLPMQRSWGARWALSSTSALQPPFSIMLTQAQEGTNKTIVADSVIPINWQPGQVYRSVVNF* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1692 304 Gene3D - 70 199 IPR036908 -
Dod07g1692 304 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 215 300 IPR007117 -
Dod07g1692 304 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 102 203 IPR007112 -
Dod07g1692 304 PANTHER EXPANSIN-LIKE PROTEIN B1 50 304 - -
Dod07g1692 304 Pfam Expansin C-terminal domain 204 289 IPR007117 -
Dod07g1692 304 SUPERFAMILY Barwin-like endoglucanases 82 200 IPR036908 -
Dod07g1692 304 Pfam Lytic transglycolase 139 192 IPR009009 -
Dod07g1692 304 Gene3D - 200 304 IPR036749 -
Dod07g1692 304 PRINTS Expansin/Lol pI family signature 101 119 IPR007118 GO:0005576
Dod07g1692 304 PRINTS Expansin/Lol pI family signature 244 258 IPR007118 GO:0005576
Dod07g1692 304 PRINTS Expansin/Lol pI family signature 186 202 IPR007118 GO:0005576
Dod07g1692 304 PRINTS Expansin/Lol pI family signature 83 98 IPR007118 GO:0005576
Dod07g1692 304 PRINTS Expansin/Lol pI family signature 286 300 IPR007118 GO:0005576
Dod07g1692 304 PRINTS Major pollen allergen Lol pI signature 253 270 IPR005795 GO:0005576|GO:0019953
Dod07g1692 304 PRINTS Major pollen allergen Lol pI signature 137 147 IPR005795 GO:0005576|GO:0019953
Dod07g1692 304 PRINTS Major pollen allergen Lol pI signature 175 190 IPR005795 GO:0005576|GO:0019953
Dod07g1692 304 PRINTS Major pollen allergen Lol pI signature 206 221 IPR005795 GO:0005576|GO:0019953
Dod07g1692 304 PRINTS Major pollen allergen Lol pI signature 222 237 IPR005795 GO:0005576|GO:0019953
Dod07g1692 304 PANTHER EXPANSIN-B3 50 304 - -
Dod07g1692 304 SUPERFAMILY PHL pollen allergen 204 300 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1692 Dod-Chr7 44846268 44851291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1692 67 304 Expansin Gene Family AT1G65680 48.988 3.25e-76 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1692 - - gmx:100786475 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1628 01 46967247 46968801 Dod07g1692 07 44846268 44851291 PCT