Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1688 ATGTCAGATGAAAAAGACACAGTCTTCAATGATGATGTGTTGGGGTTGATTGTGTTCAAGGCTGGTCTACAAGACCCAGAAGGGAAACTCTCTACTTGGAATGAAGATGATTATAGTCCTTGCAACTGGGTTGGTGTGAAATGTGACCCTTCAATCAATAGGGTCAATGCCCTTGTTCTTGATGGATTCTCACTTTCTGGCCACATTAATAGAGGGCTATTGAGATTGCAGTTCCTTCAAATCTTGTCCCTTTCTAGGAACAACTTCACAGGTACCATAAACCCTGATCTTACCAGCCTTGGGAATTTGCAAGTTCTTGATCTGAGTGAGAACAATCTTTCTGGACCAATCCCACATGGGTTTTTCCAACAATGTTGGTCTCTAAGAGCAGTTTCATTTGCTAAAAACAACCTCACGGGTAAGATTCCTGATTCGTTGAGCTCATGTACCTCATTGGAAACACTTAACTTTTCTTCCAATCAGCTACGTGGGGAATTGCCATCTGGGGTATGGTTTTTGAGGGGTCTGCAATCATTTGATCTGTCAAGTAATTTGCTTGAGGGAGAGATTCCTGAAGGAATTCAGAATCTGTATGATTTGAGGGAGTTAAGGCTGGGGAAGAACAGGTTCATAGGTAGGCTTCCTGAGGATATTGGAGGGTGCTTGCTTTTGAAGTTGATTGATTTCAGTGGCAATTTTCTCTCTGGGAAACTTCCTGAGTCAATGCAAAGGCTCACCTCATGCACATCCCTCAGTTTGCAGGGAAATTCATTCACAGGAGGCATTCCTAATTGGATTGGAGAGTTGAAGAATCTAGAGATACTGGATCTTTCTGCAAATAGATTTTCTAGTTGGATTCCACAATCAATTGGAAGTCTTAACTCACTAGGTGTATTAAATTTATCAAGGAATGATATCAGAGGAAACCTGCCAGATTCAATGATAAGCTGCATTAAGCTTTTGGTTCTTGACATAAGTCACAATCACATGGAAGGGCCTCTTCCTTCATGGATATTTAAGATGGGTTTACAAAGCATCTCACTTTCTGGAAAAAGCTTCAACAAATCCGTACCAGTTTCTTATCATGGTCTTCAGGTTTTGGATTTGTCATCAAATGCATTTTCTGGAAAACTTCCATCTGCCATTGGAGGCCTCAGTAGCTTGCAAGTCTTAAATTTGTCTACCAACAACATCTCTGGTACTATTCCAGTGAGTATAGGAGAACTTAAATCTTTGTACATTCTTGACTTGAGTGGCAACAAGCTTAATGGAAGCATTCCTTCTGAAATAGAACGGGCAGTTTCTCTCAGTGAACTGAGGCTACAAAAGAACTTGTTAGGTGGGAGAATTCCTGCACAAATTGACAAGTGTTCATCCTTAACATCTTTGAATCTTTCTCACAACAAGCTTAATGGTTCCGTCCCTGCACCAATTGCAAATCTAACCAATCTTCAGTATGTGGATTTGTCATGGAATGAACTCTCTGGAAACTTACCAAAGGAGCTAACAAATCTTTCCCAGCTTTTCTCATTTAATGTGTCACACAATCACCTTCAAGGAGAGCTGCCAGTGGGTGGTTTCTTCAATACTATCTCTCCCTCGTCCGTCACTGGTAATCCATTGTTGTGTGGTTCTGTTGTCAATCACTCCTGCCCATCTTACCATCAAAAACCAATTGTCCTAAATCCCAATTCTTCTTACTCCAACTCAGGAGCTTCCTTAAAAAACCGCCATCATAAGGTCATCTTCAGTATATCTGCCCTTATTGCTATTGGTGCAGCTGTTTTTATTGCTGTTGGTGTGGTGGCTGTTACTCTCCTCAATATCCATGTGAGGAGGTCCTCAATGTTGCGTTCTGCTGCTCCATTTGCATTCTCCGGTAGCGAGGACTATAATTGCTCGCCTGCGAACGATCCAAACTATGGTAAGCTCGTGATGTTTTCTGGTGATGCTGAATTCGCTGATGGGGCTATTAATCTTCTTAACAAAGACAACGAAATTGGCCGCGGTGGATTTGGAGTTGTTTATTGCACTGTCCTTAGAGATGGTCATTCTGTTGCGATCAAGAAGCTCACAGTCTCCGGCTTGATCAAGTCGCAAGAAGACTTCGAGAGCGAAGTCAAGAAGATTGGGAAGGTCAAGCACCAGAACCTTGTGGCACTTGAAGGTTATTATTGGACTTCATCCTTGCAGCTCCTTATTTATGAGTACCTAGCTAGAGGGAGTTTGCATAAGCTCCTCCATGATGATGATAGCAAAAATGTGCTTTCTTGGCAACAAAGGTTCAAGATTATTCTTGGCATGGCAAGAGGGTTGGCCTATTTGCACCAAAATAACATAATCCATTATAATCTAAAATCAAGCAATGTCCTGATTGATTGTTCTGATGGGCCAAAAATAGGAGATTGTGGTTTGGTGAGCCTATTGCCAAAGCTAGACCATTATGTCTTGAGCAGCAAGATCCAAAGTGCACTTGGATACATGGCTCCTGAGTTCGCTTGCCGCACGGTTAGGATAACCGAGAAATGCGACATATATGGCTTCGGAATCCTGGTTCTTGAAGTGGTGACAGGAAAAAGGCCCGTGGAATACATGGAGGATGATGTGGTTGTTCTTTGTGACATGGTGAGGAGTGCATTGGAGGAAGGCAAGTTGGAACAATGTGTTGATGAGAGGCTTTTGGGAAATTTTGCTGCAGAGGAGGCAATTCCTGTGATGAAGTTGGGGTTAGTTTGTGCATCACAAGTGCCATCAAACCGTCCAGATATGGCTGAGGTTGTCAACATACTAGAGTTGGTCCAATGCCCTTCTGAAGGGCAAGAGGAAATACAATGA 2835 0.4247 MSDEKDTVFNDDVLGLIVFKAGLQDPEGKLSTWNEDDYSPCNWVGVKCDPSINRVNALVLDGFSLSGHINRGLLRLQFLQILSLSRNNFTGTINPDLTSLGNLQVLDLSENNLSGPIPHGFFQQCWSLRAVSFAKNNLTGKIPDSLSSCTSLETLNFSSNQLRGELPSGVWFLRGLQSFDLSSNLLEGEIPEGIQNLYDLRELRLGKNRFIGRLPEDIGGCLLLKLIDFSGNFLSGKLPESMQRLTSCTSLSLQGNSFTGGIPNWIGELKNLEILDLSANRFSSWIPQSIGSLNSLGVLNLSRNDIRGNLPDSMISCIKLLVLDISHNHMEGPLPSWIFKMGLQSISLSGKSFNKSVPVSYHGLQVLDLSSNAFSGKLPSAIGGLSSLQVLNLSTNNISGTIPVSIGELKSLYILDLSGNKLNGSIPSEIERAVSLSELRLQKNLLGGRIPAQIDKCSSLTSLNLSHNKLNGSVPAPIANLTNLQYVDLSWNELSGNLPKELTNLSQLFSFNVSHNHLQGELPVGGFFNTISPSSVTGNPLLCGSVVNHSCPSYHQKPIVLNPNSSYSNSGASLKNRHHKVIFSISALIAIGAAVFIAVGVVAVTLLNIHVRRSSMLRSAAPFAFSGSEDYNCSPANDPNYGKLVMFSGDAEFADGAINLLNKDNEIGRGGFGVVYCTVLRDGHSVAIKKLTVSGLIKSQEDFESEVKKIGKVKHQNLVALEGYYWTSSLQLLIYEYLARGSLHKLLHDDDSKNVLSWQQRFKIILGMARGLAYLHQNNIIHYNLKSSNVLIDCSDGPKIGDCGLVSLLPKLDHYVLSSKIQSALGYMAPEFACRTVRITEKCDIYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRSALEEGKLEQCVDERLLGNFAAEEAIPVMKLGLVCASQVPSNRPDMAEVVNILELVQCPSEGQEEIQ* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1688 944 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 7 935 - -
Dod07g1688 944 SMART LRR_sd22_2 409 432 - -
Dod07g1688 944 SMART LRR_sd22_2 269 295 - -
Dod07g1688 944 SMART LRR_sd22_2 481 507 - -
Dod07g1688 944 SMART LRR_sd22_2 173 196 - -
Dod07g1688 944 Pfam Leucine rich repeat 249 306 IPR001611 GO:0005515
Dod07g1688 944 Pfam Leucine rich repeat 435 494 IPR001611 GO:0005515
Dod07g1688 944 Pfam Leucine rich repeat 363 422 IPR001611 GO:0005515
Dod07g1688 944 Pfam Leucine rich repeat 102 162 IPR001611 GO:0005515
Dod07g1688 944 Pfam Leucine rich repeat N-terminal domain 10 49 IPR013210 -
Dod07g1688 944 Gene3D Phosphorylase Kinase; domain 1 644 737 - -
Dod07g1688 944 PRINTS Leucine-rich repeat signature 103 116 - -
Dod07g1688 944 PRINTS Leucine-rich repeat signature 409 422 - -
Dod07g1688 944 Gene3D Ribonuclease Inhibitor 275 554 IPR032675 -
Dod07g1688 944 ProSitePatterns Protein kinases ATP-binding region signature. 667 690 IPR017441 GO:0005524
Dod07g1688 944 Gene3D Ribonuclease Inhibitor 10 167 IPR032675 -
Dod07g1688 944 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 935 - -
Dod07g1688 944 SUPERFAMILY Protein kinase-like (PK-like) 661 934 IPR011009 -
Dod07g1688 944 CDD STKc_IRAK 667 931 - -
Dod07g1688 944 ProSiteProfiles Protein kinase domain profile. 661 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1688 944 Pfam Protein tyrosine and serine/threonine kinase 662 928 IPR001245 GO:0004672|GO:0006468
Dod07g1688 944 Gene3D Ribonuclease Inhibitor 168 265 IPR032675 -
Dod07g1688 944 SUPERFAMILY L domain-like 28 353 - -
Dod07g1688 944 Gene3D Transferase(Phosphotransferase) domain 1 738 942 - -
Dod07g1688 944 SUPERFAMILY L domain-like 274 536 - -
Dod07g1688 944 SMART LRR_typ_2 197 221 IPR003591 -
Dod07g1688 944 SMART LRR_typ_2 100 124 IPR003591 -
Dod07g1688 944 SMART LRR_typ_2 481 504 IPR003591 -
Dod07g1688 944 SMART LRR_typ_2 269 292 IPR003591 -
Dod07g1688 944 SMART LRR_typ_2 173 196 IPR003591 -
Dod07g1688 944 SMART LRR_typ_2 409 433 IPR003591 -
Dod07g1688 944 SMART LRR_typ_2 385 407 IPR003591 -
Dod07g1688 944 SMART LRR_typ_2 293 317 IPR003591 -
Dod07g1688 944 SMART LRR_typ_2 505 529 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1688 Dod-Chr7 44804951 44809082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1688 6 943 Receptor kinase-like Gene Family AT3G56370 60.870 0.0 1103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Dod07g1688 PK_Tyr_Ser-Thr 9.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1688 - - gmx:100791204 1524.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1688 07 44804951 44809082 Dod07g1688 07 44804951 44809082 ECH
Dod01g0943 01 17287127 17290152 Dod07g1688 07 44804951 44809082 PCT