Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1667 ATGGCGATTTCTCCGCAAACGTTCACTCCAAGAAAACGACGATCCTCCGGGGGGTCGTTTACCTCACAGAAACAAAACGACACCAACCTCCTCCACTCCCTGCTCCACCTAACGACACAGATATCTTCCGTCAACACTTCAATGACGACGCAGCAGCTGCTATTGAAACGCAGCGTTGCATCCGTGGTTCGCAAGGCGAAGCTCCTCGCCGTTCTCTTCGAGGACCTGACGCGGAATTCCAATTCTACCCCTGGGTGTTCTTCTTCTTCTTCTTCTTCCTCTTCGTTCCTCCTATGCCTCGAAGAAACCTACATCGTTCTGCACCGGATCAAAAACCTAATCGAAGATTGCTCCAATGGAAGCAAATTCTCACTCCTCATGCAGATTGAAACCGTCGCCGACAACTTCCACAAGCTCACCGGAGAACTCTCCACGCTTCTCGACATCTTCCCGGTCCACGATCTGAACCTAAACGACGACGTTCGCGAGCTCGTTATCCTCATCAGAAAACACTGCTCGCAATCGAAGCCAGTGGTAGAAGAAACGAAAGAAAAGCTCCGAAACGACGTCGTTTCGGTGCTCGAAAGCATCAAGAACGAGATCGTCCCCGATCGTAACCACCTCGCCGCGATCTTAGAGAGGTTGGAGATTCGCGACTCTTCATCCTGCAGAGCGGAGATCGAGAGCTTGGAGCAAGAGATTCAGAATCGGAGCGAAGAACAATCGAAATCAGAGATCGTTGCTTTGATCGGTCTCGTTCGTTACGCAAAGTGTGTGCTTTTCGGTGCTTCCACTGCGGCGGCGTCGCCGGAAAATGCTCACCAACGGAAACAGCCGTTGTCGGATGTGGTTGTTCCGGCGGATTTCCGGTGTCCGATAAGCCTCGAGCTCATGCGTGATCCCGTCGTCGTGGCAACGGGACAGACGTACGATCGTGATTCCATCAAGCTCTGGATGGATTCTGGGCACAACACGTGTCCCAAGACGGGTCAACAACTTTCCCACACAGAACTCATACCCAATCGCGCGCTCCGGAACATGATAGCTTCGTGGTGCCGGGAGCAGAGGATCCCCTTCGAAGCGGAAACCGTTACCGGCAAACCCAACGGCCGCGTAACTAACAAGGCCGCGCTTGAAGCCACTCGCATGACGGCATCTTTCCTCGTCAACAAGCTGAAACTCCCTGTAACTAACTCTCAGTCGATGGAGGAGTTAAACGGCGAAGTTTACGAGCTTCGGGTTCTTGCAAAAACAGACTCGGATAGCCGAGCCTGCATCGCCGAAGCTGGTGCCATACCGCTTCTGGTTCGGTACCTCAGCTTCGACGTCGGTGTTCACAGCCCGAGCCTACAGGTTAACGCCGTTACAACGATATTAAACCTTTCGATACTGGAAGCGAACAAAACGAGGATAATGGAAACTGACGGCGCGTTAAACGGCGTCGCCGAGGTTTTGCGTTCGGGTGCCACGTGGGAGGCCAAGGCTAATGCCGCAGCTACAGTGTTTAGCTTATCGGGTGTGGCAGCTTATAGGAAGAGGCTTGGTAGAAAGACTCGTGTCGTGAATGGATTGGTCCAGTTGGCGAGGTGTGGGCCAGAGGGAGCGAGGAGGGATGCTTTGGCGGCGATTTTGAGTTTGGCGGCGGATAGGGAGAGCGTGGGGAGGTTGGTGGAGGGCGGCGCGGTGGACATGGCGGTGGAGTTGATGGCAGCGGTGCCGGAGGAGGCGGCGACGGTGCTTGAGGCCGTGGTGAAGCGCGGTGGTCTGGTAGCGGTGGCGGCGGCGTATGCAGGGATCAAGAGGCTTGGGGCGGTGCTGAGGCAAGGGTCAGAGAGGGCTAGGGAGAGCGCGGCGGCGACGCTGGTGACGATGTGCCGAAAGGGTGGATCAGAGGTGGTGGCGGAGCTGGCGGCGATCCCGGGCGTGGAGAGAGTGATTTGGGAGCTCATGGCGGTGGGAAGCATCCGAGGGAGGAGGAAGGCGGCGACACTGTTGAGGATCTTACGGCGGTGGGCGGCAGGGCTGGACGGCGGCGAGAGTGAGGGTTTCTCCACAATTACCATAACTTCCACTACCACTCTGGCTGTTCCAACTTCCAATTCAATAGCACAGTAA 2115 0.5589 MAISPQTFTPRKRRSSGGSFTSQKQNDTNLLHSLLHLTTQISSVNTSMTTQQLLLKRSVASVVRKAKLLAVLFEDLTRNSNSTPGCSSSSSSSSSFLLCLEETYIVLHRIKNLIEDCSNGSKFSLLMQIETVADNFHKLTGELSTLLDIFPVHDLNLNDDVRELVILIRKHCSQSKPVVEETKEKLRNDVVSVLESIKNEIVPDRNHLAAILERLEIRDSSSCRAEIESLEQEIQNRSEEQSKSEIVALIGLVRYAKCVLFGASTAAASPENAHQRKQPLSDVVVPADFRCPISLELMRDPVVVATGQTYDRDSIKLWMDSGHNTCPKTGQQLSHTELIPNRALRNMIASWCREQRIPFEAETVTGKPNGRVTNKAALEATRMTASFLVNKLKLPVTNSQSMEELNGEVYELRVLAKTDSDSRACIAEAGAIPLLVRYLSFDVGVHSPSLQVNAVTTILNLSILEANKTRIMETDGALNGVAEVLRSGATWEAKANAAATVFSLSGVAAYRKRLGRKTRVVNGLVQLARCGPEGARRDALAAILSLAADRESVGRLVEGGAVDMAVELMAAVPEEAATVLEAVVKRGGLVAVAAAYAGIKRLGAVLRQGSERARESAAATLVTMCRKGGSEVVAELAAIPGVERVIWELMAVGSIRGRRKAATLLRILRRWAAGLDGGESEGFSTITITSTTTLAVPTSNSIAQ* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1667 704 MobiDBLite consensus disorder prediction 1 25 - -
Dod07g1667 704 SUPERFAMILY RING/U-box 282 358 - -
Dod07g1667 704 SUPERFAMILY ARM repeat 409 668 IPR016024 -
Dod07g1667 704 SMART arm_5 419 463 IPR000225 GO:0005515
Dod07g1667 704 Coils Coil 220 240 - -
Dod07g1667 704 Pfam Armadillo/beta-catenin-like repeat 420 462 IPR000225 GO:0005515
Dod07g1667 704 Gene3D - 31 153 IPR036537 GO:0007166
Dod07g1667 704 Gene3D - 394 594 IPR011989 -
Dod07g1667 704 PANTHER U BOX DOMAIN-CONTAINING 15 685 - -
Dod07g1667 704 SMART Ubox_2 288 351 IPR003613 GO:0004842|GO:0016567
Dod07g1667 704 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 430 476 IPR000225 GO:0005515
Dod07g1667 704 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 16 15 685 - -
Dod07g1667 704 Pfam U-box domain 285 356 IPR003613 GO:0004842|GO:0016567
Dod07g1667 704 CDD RING-Ubox_PUB 289 331 IPR045210 -
Dod07g1667 704 ProSiteProfiles U-box domain profile. 284 358 IPR003613 GO:0004842|GO:0016567
Dod07g1667 704 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 285 358 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1667 Dod-Chr7 44448264 44451144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1667 1 702 U-box Gene Family AT5G01830 55.099 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1667 - - cam:101506886 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1667 07 44448264 44451144 Dod07g1667 07 44448264 44451144 ECH