Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1654 ATGTCTTCAAGGGGGAGAAAAAAAGCTGCTATGCAACGCATGTTGCAAGAACTTCGATCTGCCACAAATTCCAGTGCTATGAACAAAGCCTCAATTATTGTGGATGCTACCAAATACATAGAGGAGTTGAAGCAGAAAGTTGAGGGACTAAACTCAGAGCTGGAAACCGGCGAATCGTCAACCTCCCAAGATGAATTTCCTATGGTCACCGTAGAAACCCTAGAAAGGGGTTTCCTCATTAACGTGTTTTCAGAAAGGAATTGCCCCAATATGCTTATGGCAATACTCGACGCCTTCGAAGAACTAGCGCTTGATGTGCTTGATGCTAGGGTTTCTTGTGAGGACAATTTCCAGCTAGAAGCTGTGGGAGGAGAAAGTCAAGAGAACGAGAGTATCGATGCACAAGTGGTCAAGCAAGCAGTGCTGCAAGCAATCAAGAACATGGAATGA 450 0.4489 MSSRGRKKAAMQRMLQELRSATNSSAMNKASIIVDATKYIEELKQKVEGLNSELETGESSTSQDEFPMVTVETLERGFLINVFSERNCPNMLMAILDAFEELALDVLDARVSCEDNFQLEAVGGESQENESIDAQVVKQAVLQAIKNME* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1654 149 Gene3D - 4 59 IPR036638 GO:0046983
Dod07g1654 149 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 11 57 IPR036638 GO:0046983
Dod07g1654 149 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 148 - -
Dod07g1654 149 Coils Coil 33 60 - -
Dod07g1654 149 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1654 Dod-Chr7 44118378 44120571 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1654 - - aip:107628501 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1654 07 44118378 44120571 Dod08g0963 08 11946023 11947736 ECH
Dod07g1654 07 44118378 44120571 Dod04g0420 04 5551924 5554399 ECH
Dod07g1654 07 44118378 44120571 Dod07g1654 07 44118378 44120571 ECH
Dod07g1654 07 44118378 44120571 Dod05g0432 05 6068943 6070760 ECH