Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1616 ATGGGAAACACTAGTTGGCATGTCAAGGATTTCCACACAGACCCTCTTCAGCTTCTTCACTCAAAAGATGATGGGGCGATGAAGAAGAAATGGAGGGGTCATAAGGGTAGTTCTAGTTTCAATTTTTTGGCATTTTTTCTGTTTCTTCAAGTTTTGGCTTCTACCATTGAGCCTGTCAAATGCCACCTGTTTGATGGGGTGGTTGTGACTCAAAGTGATTATCAGGCCTTGAGGGCCATCAAGCATGAGCTTATTGACATCAAAGGGGTTCTTAGGAGCTGGAATGACAGTGGTTTAGGTGCTTGTTCAGGTGGTTGGGCAGGTATCAAGTGTGTGAATGGTGAGGTCATTGCAATTCAACTCCCTTGGAGAGGGTTAGGTGGCAGAATCTCTGAGAAAATTGGGCAGCTTCAAGCACTTAGGAAGCTAAGTCTCCATGACAATGTTCTTGTTGGTCCTGTCCCTTGGTCACTTGGCTTCCTCCCTAACCTTAGAGGAGTTTATCTCTTCAATAACAGGCTTTCAGGTTCTATTCCTCCTTCTATTGGTAATTGTCCAATGCTTCAGTCCGTTGATATTAGCAATAACTCACTCACTGGTAACATCCCTCCTAGTTTGGCAAATTCTACTAGGATATTCAGGATCAATTTGAGCTTCAACTCACTTTCTGGATCCATTCCTATTAGTTTCACTGTGTCTCAATCTCTTACTATTCTTGCCCTCCAACACAACAATCTCTCTGGTTCTATCCCAGATTCTTGGGGTGGAAAGGGAAAGAGAGGTTCCCAACTTCAAGTTTTGACCCTTGCTCATAACCTCATTTCTGGTACCATTCCTGTTTCTCTCAGTAAGATGGTTTTGCTTGAAAATGTTACTTTGAGTCATAACCAGATTGAAGGGTCTATTCCAAGTGAACTAGGTGCACTTTCCAGGCTCCAAAATCTGGATCTTTCACATAATGCCGTAAATGGAAGCTTTCCTGCTAGCTTCTCCGGTCTCTCTTCTCTTGTTTCATTGAACTTAGAGGGCAATAAACTTGAGAGCCATGTACCAGACACTTTGGACAGGTTGCACAACCTTTCTGTGCTTAACCTTAAAAGCAATAAGCTTGATGGCCAAATCCCACCAACAATTGGGAACATCTCAGGCATTAGCCAAATTGATTTGTCTGAAAATAAGTTCATGGGAGGAATTCCAGATTCACTCACCAAACTTGCAAATCTCAGCTCATTCAATGTCTCATACAACAATCTGTCTGGTCCTGTCCCGTCTCTCCTCTCCAAAAGATTCAATTCTAGCTCTTTTGTAGGGAATCTTGAACTATGTGGATACTTATCAAAGCCATGCACTTCACCCCCACCTCAAAATCTACCAGCTCAAACACCAAATCCTTCTCCAAAGCCACATCACAGAAAGTTAAGTACCAAGGACATAATCCTCATAGTAGCAGGTATTCTATTGATAATTCTGTTGCTGCTGTGCTGCTTTTTGCTATGTTGTTTGATCAGGAGAAGGGCTGCTTCAAGTGGAAGGGGTGCCAAGACATCTAAAGCTGCAGCATCTGCTAGGAGTGTTAGTAAGAGTGCCCCAGGTGGTGGTGAAGTTGAGTCAGGTGGTGAAGCTGGTGGGAAGCTAGTTCACTTTGATGGGCCATTTGTGTTCACTGCTGATGATCTCTTGTGTGCCACTGCTGAGATAATGGGAAAGAGTGCATATGGAACAGCATACAAGGCTACATTGGAGGATGGTAACCAAGTTGCTGTGAAGAGGTTGAGGGAGAAGACTACCAAGGGGCAGAAGGAGTTTGAAGCTGAGGTTGCTGCGCTCGGCAAAATCAGACACCCAAATCTCTTGGCCCTTAGAGCCTACTATTTGGGTCCCAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGCCAAAAGGAAGCCTAGCATCATTTCTTCACGCTCGTGGACCTGAAATAGTGATTGAATGGCCAACAAGGATGAAAATAGCCATTGGAGTCACACGAGGCTTGAGCTCCCTCCACGACCAAGAGAACATAGTGCATGGAAATCTCACATCTAGCAACATACTACTGGATGAGCAGACAAATGCACACATTACAGATTTTGGTCTTTCAAGGCTAATGACAACTTCAGCCAACACAAACATCATTGCAACTGCAGGAAGTCTTGGCTACAATGCACCAGAGCTATCAAAGACCAAGAAGCCAAACACAAAGACTGATGTCTACAGCCTTGGTGTCATCATTCTGGAGCTCCTAACTGGAAAACCACCTGGGGAGCCAACCAATGGCATGGACTTGCCCCAATGGGTGGCATCAATAGTAAAAGAAGAGTGGACTAATGAAGTGTTTGACTTAGAGCTCATGAGGGATGGACCAACCATAGGTGATGAGCTTCTTAACACATTGAAACTGGCCCTTCATTGTGTTGATCCATCTCCGGCTGCAAGGCCAGAAGTTCAGCAAGTTCTGCAGCAATTGGAGGAGATTAAGCCAGAATTGGCTGCAGGGGTGGATGATGAAGCTAAAGTCCAAACTACTGAATAA 2553 0.4438 MGNTSWHVKDFHTDPLQLLHSKDDGAMKKKWRGHKGSSSFNFLAFFLFLQVLASTIEPVKCHLFDGVVVTQSDYQALRAIKHELIDIKGVLRSWNDSGLGACSGGWAGIKCVNGEVIAIQLPWRGLGGRISEKIGQLQALRKLSLHDNVLVGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPMLQSVDISNNSLTGNIPPSLANSTRIFRINLSFNSLSGSIPISFTVSQSLTILALQHNNLSGSIPDSWGGKGKRGSQLQVLTLAHNLISGTIPVSLSKMVLLENVTLSHNQIEGSIPSELGALSRLQNLDLSHNAVNGSFPASFSGLSSLVSLNLEGNKLESHVPDTLDRLHNLSVLNLKSNKLDGQIPPTIGNISGISQIDLSENKFMGGIPDSLTKLANLSSFNVSYNNLSGPVPSLLSKRFNSSSFVGNLELCGYLSKPCTSPPPQNLPAQTPNPSPKPHHRKLSTKDIILIVAGILLIILLLLCCFLLCCLIRRRAASSGRGAKTSKAAASARSVSKSAPGGGEVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFEAEVAALGKIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGPEIVIEWPTRMKIAIGVTRGLSSLHDQENIVHGNLTSSNILLDEQTNAHITDFGLSRLMTTSANTNIIATAGSLGYNAPELSKTKKPNTKTDVYSLGVIILELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDGPTIGDELLNTLKLALHCVDPSPAARPEVQQVLQQLEEIKPELAAGVDDEAKVQTTE* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1616 850 Pfam Leucine rich repeat N-terminal domain 71 111 IPR013210 -
Dod07g1616 850 Pfam Leucine rich repeat 310 370 IPR001611 GO:0005515
Dod07g1616 850 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 38 838 - -
Dod07g1616 850 CDD STKc_IRAK 567 832 - -
Dod07g1616 850 Gene3D Transferase(Phosphotransferase) domain 1 639 848 - -
Dod07g1616 850 Gene3D Ribonuclease Inhibitor 70 234 IPR032675 -
Dod07g1616 850 Pfam Leucine Rich Repeat 188 207 IPR001611 GO:0005515
Dod07g1616 850 Pfam Protein tyrosine and serine/threonine kinase 565 829 IPR001245 GO:0004672|GO:0006468
Dod07g1616 850 Gene3D Ribonuclease Inhibitor 236 450 IPR032675 -
Dod07g1616 850 SMART LRR_typ_2 161 185 IPR003591 -
Dod07g1616 850 SMART LRR_typ_2 357 381 IPR003591 -
Dod07g1616 850 SMART LRR_typ_2 405 428 IPR003591 -
Dod07g1616 850 SMART LRR_typ_2 309 332 IPR003591 -
Dod07g1616 850 SMART LRR_typ_2 333 356 IPR003591 -
Dod07g1616 850 MobiDBLite consensus disorder prediction 517 538 - -
Dod07g1616 850 Gene3D Phosphorylase Kinase; domain 1 567 638 - -
Dod07g1616 850 SUPERFAMILY L domain-like 110 448 - -
Dod07g1616 850 SUPERFAMILY Protein kinase-like (PK-like) 565 833 IPR011009 -
Dod07g1616 850 ProSiteProfiles Protein kinase domain profile. 561 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1616 850 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 38 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1616 Dod-Chr7 43465691 43469507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1616 62 834 Receptor kinase-like Gene Family AT3G51740 69.923 0.0 1040
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod07g1616 PK_Tyr_Ser-Thr 3.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1616 - - gmx:100799290 1306.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1616 07 43465691 43469507 Dod07g1616 07 43465691 43469507 ECH