Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1609 ATGACACTCTCACCGGTTCTCCCTCTCCTCTTCGTACTGTTCCGTTCCGCGCTTTCTCTCTCCTCCGACGGCCTCGCCCTTCTCTCTCTAAAATCCGCCGTCGATCAACCCGCCGGCTCCGCCGCATTCTCCGACTGGGACGACGGCGAGCCGACGCCGTGCCGGTGGTCCGGCGTCTCCTGCTCGAACTTTTCCGGCGAGCTCCGCGTCGTCGGCGTCGCCCTCGCCGGAAAATCTCTCCGTGGTTACATTCCGTCGGAGCTCGGGACTCTAAGGTACCTCCGGCGACTCAACCTTCACGACAACGCCTTCTACGGAGTCGTTCCGGTCCAGCTCTTCAACGCCACCGCGCTCCACAGTCTCTACCTCCACCGTAACAACCTCTCTGGTCCGTTTCCTCCGTCGCTATGCACTCTCCCCCGCCTTGAGAATCTCGATTTCTCCGACAACTCGTTCTCCGGCCACATTCCGCCGGAGCTCAAGGACTGCAAGCAGCTTCAGCGGCTGATCCTCGCGCGGAACGAATTGTCCGGCGAGGTTCCGGCCGCTGTATGGCCGGAAATGGAGAACCTCGTCCAGCTCGATCTCTCCGGGAACCAGTTCGAAGGTCCGATCCCGGACGAGATCGGCGACCTGAGCTCGCTCTCCGGCACGCTGAACCTCTCGTTCAACCACCTCTCGGGCAGGGTACCGGCGTCTCTAGGGAAATTGCCGGCGATCGTGAGCTTCGACCTCCAGAACAATAACTTCAGCGGCGAGATTCCCCAAACGGGGTCGTTTTCCAACCAGGGACCCACCGCATTCCTGGGAAACCCGAACCTGTGCGGATTTCCATTAAGGAAATCCTGCAATGATTCGGATTCAGGTCAGGGCTCGCAGGAAGGTCCCGGCTCTGCTGCACGGGCCGAGACCTTTCATACTGCCAAAGGCCTGAGTCCTGGTCTGATAATTCTGATCTCAGCAGCTGATGCTGCTGGGGTCGCCCTTATTGGGCTTGTGATTGTTTATGTTTATTGGAAGAGGAAGGATGATGGCAATGCATGTAGTTGTGCTGGGAGGAGCAAGTTTGGTGGGAATGATGATGAGAAGATGAATGTGTGTGCTTTGCCATGCATCAATGGAATGAAGAGTGATGATGATGAGGATGATGAGGAGGGTGATGGTGGAAGAGTTGAAGGGGGTTTGGTGACAATTGACAAAGGTTTTAGCTTTGAGCTTGATGAGCTTTTGAGGGCATCAGCTTACGTGTTGGGGAAGAGTGGGTTGGGGATTGTGTACAAGGTTGTGCTTGCAAATGGGGTGCCTGTGGCTGTGAGGAGATTGGGTGAGGGTGGTGATCAAAGGTACAAGGAGTTTGCTGCTGAGGTGCATGCCATTGGGAAGGTGAAGCACCCTAACATTGTGAGGTTGAGGGCTTATTATTGGGCACATGATGAGAAGCTCCTCATAAGTGATTTCATTTCTAATGGCAATTTGGCCCAAGCCCTTAGAGGAAGAAATGGACAACCATCTCCAAACCTTTCATGGTCAACCAGGCTTAGAATAGCCAAAGGAACAGCCAGGGGCTTGGCCTATCTCCATGAATGCAGTCCAAGAAAGTTTGTCCATGGTGACATCAAACCCTCCAATATCCTACTTGACAATGACTTCCAACCATACATCTCTGACTTTGGTCTTAGCCGGCTGATCAGCATCACAGGCAACAACCCCTCCACTGGTGGCTTGATGGGTGGAGCTCTTCCTTACATGAAGTCATCACAAAAAGAGAGAACCAACAATTACAAAGCCCCTGAGGCTCGTGTCCCAGGCTGCAGACCCGCCCAGAAATGGGATGTATATTCATTTGGGGTTGTGTTGCTTGAATTACTAACTGGGAAGGCACCAGAATCTTCTCCCACCACCTCAACTTCGATGGAAGTCCCTGACTTGGTGAGGTGGGTAAGAAAAGGGTTTGAACAAGAAAGTCCCTTATCTGAAATGGTTGATCCATCACTGCTACAAGAAGTGCGTGCCAAGAAAGAAGTACTATCTGTTTTTCATGTAGCACTATCATGCACTGAAGGTGACCCTGAGGTCAGGCCTAGAATGAAAACTGTCTCTGAAAATATTGAAAGGATTGGAACCTAA 2127 0.5289 MTLSPVLPLLFVLFRSALSLSSDGLALLSLKSAVDQPAGSAAFSDWDDGEPTPCRWSGVSCSNFSGELRVVGVALAGKSLRGYIPSELGTLRYLRRLNLHDNAFYGVVPVQLFNATALHSLYLHRNNLSGPFPPSLCTLPRLENLDFSDNSFSGHIPPELKDCKQLQRLILARNELSGEVPAAVWPEMENLVQLDLSGNQFEGPIPDEIGDLSSLSGTLNLSFNHLSGRVPASLGKLPAIVSFDLQNNNFSGEIPQTGSFSNQGPTAFLGNPNLCGFPLRKSCNDSDSGQGSQEGPGSAARAETFHTAKGLSPGLIILISAADAAGVALIGLVIVYVYWKRKDDGNACSCAGRSKFGGNDDEKMNVCALPCINGMKSDDDEDDEEGDGGRVEGGLVTIDKGFSFELDELLRASAYVLGKSGLGIVYKVVLANGVPVAVRRLGEGGDQRYKEFAAEVHAIGKVKHPNIVRLRAYYWAHDEKLLISDFISNGNLAQALRGRNGQPSPNLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLISITGNNPSTGGLMGGALPYMKSSQKERTNNYKAPEARVPGCRPAQKWDVYSFGVVLLELLTGKAPESSPTTSTSMEVPDLVRWVRKGFEQESPLSEMVDPSLLQEVRAKKEVLSVFHVALSCTEGDPEVRPRMKTVSENIERIGT* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1609 708 Pfam Leucine rich repeat N-terminal domain 21 62 IPR013210 -
Dod07g1609 708 ProSiteProfiles Protein kinase domain profile. 411 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1609 708 SMART serkin_6 415 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1609 708 Pfam Protein kinase domain 416 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1609 708 Gene3D Ribonuclease Inhibitor 185 285 IPR032675 -
Dod07g1609 708 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 17 708 - -
Dod07g1609 708 Gene3D Ribonuclease Inhibitor 20 184 IPR032675 -
Dod07g1609 708 CDD STKc_IRAK 417 706 - -
Dod07g1609 708 Gene3D Phosphorylase Kinase; domain 1 401 486 - -
Dod07g1609 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Dod07g1609 708 Gene3D Transferase(Phosphotransferase) domain 1 487 708 - -
Dod07g1609 708 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 708 - -
Dod07g1609 708 SUPERFAMILY Protein kinase-like (PK-like) 416 701 IPR011009 -
Dod07g1609 708 SUPERFAMILY L domain-like 21 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1609 Dod-Chr7 43428063 43432196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1609 17 706 Receptor kinase-like Gene Family AT1G67510 67.324 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod07g1609 Pkinase 2.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1609 - - var:108346287 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1034 01 19255738 19260958 Dod07g1609 07 43428063 43432196 PCT