Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1592 ATGATGCTCCCTGAGGTTCTTGAGTCCCCATGGTCATCATTCTTTGAAGACAATAGCTCAACTTTAGAATTTGATCAATTTGATCAATTAGTTGAGAACTTTGACTTTGAAGTGGATGCACATGTGGGTGATTCAAGATTTAATTCTTTGTTTAACACTCCACTTGATACAACTACTTATGTTTCCTCAACCCCTTTATCTTCCTTCATTTTCAAGTTCAACAATTATAATTTCCACTACCCAATTGAGGAAGATACCTTGCCACTCCCGTCACTCATGGATGTTGTGTCCATGGAATTTGATGACTTTGATCCCAGCCTTGGTGCTCACCAGGTTGTGGATATTCAATTTCAAGGATACCCAGAAGAAAGTGAGGGTACCTTCCCTTCACAAAATTTTTCAAGTGAAGGAGAATATGCTTGGAGTCCTACACCATCTTTGAAGTCAGATTTGTCCTCAACTCAATATCAACCATCACTGATCTTGCCTCAAGAAGGCATGGAAATTGACAAGAAAGTGGTGCTTCCACACATGTTGGAAGCCTGTGGTGAAGCCCTTGACCAAGGGCATAAACCACAAGCAGAAGAGATCTTGAGATGCATGAGCCATAAAGTTAGTCCAATTGCTGAAGAACCCCTTGAGCGCCTTGCATGCTACTTGTCCCAAGACATGACAAACCAAGGAGATTATCTCAAACAAGAGGCTAATAAAAGCTTTGGGGCTGCATTCAGGGCTTTGTACCAAGGCACCCCACATGGGAAAGTTGCTCACTTTGTTGCAAATTCCGCAATTCTTGAAGTCATACCACATGATTCTGAGGTTATACACATAGTGGACTTCGATATGGGACAAGGGGTTCAATGGCCTCCTATGATTGAGGCCATTGCAAGCATGAAAAAAACATTGAAATTGACATCAATCAAATGGGGTGAGGAAATCTATGAATGTAATTCCCCTCCATGGAATTTTGAGGAAATTAGAAGGCACCTCTATGAGCATGGTAGATCTTGTGGTTTGATGTTGAAAGTTGAGGAGATGGGAATGGGGGAAGTGATTTTAGAGCTTAAGAAAATGAACAAAAGGGGTGGTAGAAAGGACTTTTTGGCCTTCAACTGTATGGCCGGCCTTCCACATATGGGGAGAGAGAGGAGTAGAAGACATGTCATTGACTTTCTAAATTTGATCAATAGTTGTTGTGGCAACAAGGGAATTGTGACTTTCGGGGATGGGGGTGCCTATGAGAAGTTTAAAAATGAGTTGGACTTCATGTCATTCTTTAATGGACATTTGGTTCATTACAAGGCCTTGTTAGAATCAATTCAGTCACATTTCCCAACACGTTTCTCAGAAGCTAGAACTGCCATTGAGTCCCTTTTTGTAGCATCTAATGTCTCTTCTCATGGTTGGTTACAAAATTGGGAAGAGATGAGAGAGGATTCCTATCTTCAAGGAGAGATTGGCTTAGATGGTTGCAGATTAAGCAAAGAAATTTTAGCGGAAGTAAAAGAGTTATTGAAGGGGAGTGAAGGTTCATATGAGGCCAGGATTGAGGGACAAAATTGCAATAAATTGCTTTTGCAGTGGAATGGAATCCAGCTAGTAAGAGTTTCAGCATGGAGGAATTAA 1626 0.4114 MMLPEVLESPWSSFFEDNSSTLEFDQFDQLVENFDFEVDAHVGDSRFNSLFNTPLDTTTYVSSTPLSSFIFKFNNYNFHYPIEEDTLPLPSLMDVVSMEFDDFDPSLGAHQVVDIQFQGYPEESEGTFPSQNFSSEGEYAWSPTPSLKSDLSSTQYQPSLILPQEGMEIDKKVVLPHMLEACGEALDQGHKPQAEEILRCMSHKVSPIAEEPLERLACYLSQDMTNQGDYLKQEANKSFGAAFRALYQGTPHGKVAHFVANSAILEVIPHDSEVIHIVDFDMGQGVQWPPMIEAIASMKKTLKLTSIKWGEEIYECNSPPWNFEEIRRHLYEHGRSCGLMLKVEEMGMGEVILELKKMNKRGGRKDFLAFNCMAGLPHMGRERSRRHVIDFLNLINSCCGNKGIVTFGDGGAYEKFKNELDFMSFFNGHLVHYKALLESIQSHFPTRFSEARTAIESLFVASNVSSHGWLQNWEEMREDSYLQGEIGLDGCRLSKEILAEVKELLKGSEGSYEARIEGQNCNKLLLQWNGIQLVRVSAWRN* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1592 541 MobiDBLite consensus disorder prediction 124 152 - -
Dod07g1592 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 540 IPR005202 -
Dod07g1592 541 ProSiteProfiles GRAS family profile. 166 540 IPR005202 -
Dod07g1592 541 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 25 540 - -
Dod07g1592 541 Pfam GRAS domain family 177 540 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1592 Dod-Chr7 43230922 43232547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1592 176 540 GRAS Transcription Factor Family AT5G66770 25.581 3.29e-17 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod07g1592 GRAS 2.5e-38 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1592 - - gmx:100791800 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1592 07 43230922 43232547 Dod07g1592 07 43230922 43232547 ECH