Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1587 ATGGAAGGAAGCCATGGCTCCCAATGTTCAAAGACAAGCCCTTCTAACCTTGATGAAGATGAGTGTGAAAGCAAGGCCAATGAACATGATGAAAGCAAGCAAAACAACAATGGAGGGTGCTCAAGCAACAGCACACTGGCAGAGAATGAGAAGAAGATTAGGCCTTATGTTAGATCCAAGATGCCAAGGCTCAGGTGGACGCCTGATCTTCACCTTCGCTTTGTTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACACCAAAGTTGGTTCTTCAATTGATGAATATCAAAGGCTTGAGTATTGCCCATGTCAAGAGTCATTTACAGGGATATAACCCAAGCCAAACTTCGTCCTACAGATTTGGATATGGGGATGGTTCTTTTAGTATCTATGAAAGAATGATGCATAGACCTTTCAATTGGGCTAATAGCATCTTCCGGGTTGGTTCTTCCAATTTTGGTGAACAATCAACAAGTGGTTTCAAAGTCCACGAACCAAAAAAAGATGAATTCCTCTCATTTGGTTCCAATGAATCTCAATCCACACGGACAAGATTAGAGAGTCATGTTGGTACTCTTACCCCATCATCAACCCATGTACAATATCAAAGAGCACAAGACCTTATGCCATTCAACAAAATTGCAAATCCACCACCTGAACTGAATAAGATATTGAAAAGGAAGGCCTCATCAGGTACTGAAATTGATTTGGATCTGTCACTAACATTGAATTCAAAGATCGATGGTGATCAAGGAAGATTGGAGGACCATAATGAAGTTGATAGCAATTTATCTCTCTCTTTGTACCCTCCTCAATCCTCCTCATCTAATCTTAGCAGCAGGCTGAAGGAAACACAAGATCTTTGCAATAAGGAGCAAGGGAAAATGGCCAGTACCCTGGATCTGACTATATGA 921 0.4148 MEGSHGSQCSKTSPSNLDEDECESKANEHDESKQNNNGGCSSNSTLAENEKKIRPYVRSKMPRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQGYNPSQTSSYRFGYGDGSFSIYERMMHRPFNWANSIFRVGSSNFGEQSTSGFKVHEPKKDEFLSFGSNESQSTRTRLESHVGTLTPSSTHVQYQRAQDLMPFNKIANPPPELNKILKRKASSGTEIDLDLSLTLNSKIDGDQGRLEDHNEVDSNLSLSLYPPQSSSSNLSSRLKETQDLCNKEQGKMASTLDLTI* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1587 306 MobiDBLite consensus disorder prediction 16 32 - -
Dod07g1587 306 MobiDBLite consensus disorder prediction 1 15 - -
Dod07g1587 306 PANTHER - 138 306 - -
Dod07g1587 306 PANTHER - 3 113 - -
Dod07g1587 306 Gene3D - 61 117 - -
Dod07g1587 306 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 113 IPR044848 GO:0003700
Dod07g1587 306 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 138 306 IPR044848 GO:0003700
Dod07g1587 306 Pfam Myb-like DNA-binding domain 64 113 IPR001005 -
Dod07g1587 306 MobiDBLite consensus disorder prediction 269 286 - -
Dod07g1587 306 MobiDBLite consensus disorder prediction 33 49 - -
Dod07g1587 306 MobiDBLite consensus disorder prediction 1 54 - -
Dod07g1587 306 SUPERFAMILY Homeodomain-like 60 118 IPR009057 -
Dod07g1587 306 MobiDBLite consensus disorder prediction 269 288 - -
Dod07g1587 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 118 IPR017930 -
Dod07g1587 306 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 62 113 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1587 Dod-Chr7 43170827 43172494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1587 29 126 G2-like Transcription Factor Family AT2G42660 58.586 1.27e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod07g1587 Myb_DNA-binding 8.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1587 - - gmx:102660246 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1587 07 43170827 43172494 Dod07g1587 07 43170827 43172494 ECH