Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1583 ATGGATTGCATTCATTCCGGTGGCAACACTGCCTCATGTGAAGCAGGGTCATCTTCAAAGGCCAAAAACAAGAGGAATAAGGAGAGCACAAAGGGTTTGAAGAAAAATAGCAAGGGTGTGAGGCTTTCCACTGACCCACAAAGTGTGGCAGCAAGAGAAAGAAGGCATAGAATCAGTGACAGGTTCAAGATCTTGCAAAGCATGGTTCCTGGAGGGAGCAAGATGGACACAGTTTCTATGTTGGAGGAAGCCATTCACTATGTCAAGTTCCTCAAGACACAGATTTGGCTTCACCAAACCATGATGATGAATTTTGTGGATGATGAGTGTTCACCCTCACCAATGTTCCTTCTTCCTGATCATCAGTGCTATTTCCCCTCTGAACAGATCAATATTCCTGATCCTCAGCAAAACCCTTCAGTGGAAAGTACCTTACCACAGCTACCACTTGATCAAGGCACCAACTTTGATGATGCCACTTTGAAACATTGGCCAGCTTAG 501 0.4491 MDCIHSGGNTASCEAGSSSKAKNKRNKESTKGLKKNSKGVRLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMMMNFVDDECSPSPMFLLPDHQCYFPSEQINIPDPQQNPSVESTLPQLPLDQGTNFDDATLKHWPA* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1583 166 MobiDBLite consensus disorder prediction 20 35 - -
Dod07g1583 166 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 100 IPR036638 GO:0046983
Dod07g1583 166 CDD bHLH_AtIND_like 43 103 - -
Dod07g1583 166 PANTHER TRANSCRIPTION FACTOR LAX PANICLE 1 22 136 - -
Dod07g1583 166 Gene3D - 46 100 IPR036638 GO:0046983
Dod07g1583 166 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 22 136 IPR045843 GO:0003700|GO:0006355
Dod07g1583 166 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 42 91 IPR011598 GO:0046983
Dod07g1583 166 MobiDBLite consensus disorder prediction 1 54 - -
Dod07g1583 166 Pfam Helix-loop-helix DNA-binding domain 52 91 IPR011598 GO:0046983
Dod07g1583 166 SMART finulus 48 97 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1583 Dod-Chr7 43010779 43011704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1583 34 99 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 59.091 2.84e-22 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod07g1583 HLH 5.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1583 - - adu:107475363 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1583 07 43010779 43011704 Dod07g1583 07 43010779 43011704 ECH