Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1569 ATGAAGGCTTCAAAATCACTTGGAAGAATGCAAGAAGAATGGTATACTGAACCCCTATCCATTACATCTGATGGATCCAGTTCATCACCTGCTTCCAAGAAAATGGATGAATTCTTTGTCAAGCGCAACAAGGTGAATCAAGCATTGGTAATATTTAGGAACATGTTCGTGGAACTTCTGAGTGAACATGAAGCAGGCCAAATTGGTCATATGAAAGCAACACACAAAGCTTTGATGGAAGCTGCAATGTTGATGCAGAAAAAGCATCTATTGGTGAACAGCAAAAAGCGGGTGGGACATGTCCCGGGAATTGAAGTTGGCAACCTATTTCAGTACAGGAATGAGCTCTATGTCGTCGGTCTCCATCGCCAGTTTACAAGTGGTATTGATTACATGTGGAAGGGTGACTATACTTTGGCCACAAGCATTGTGGTAACTGATCGCTATGCCAATGCTCGAGAATCGAGTGGTGCATTGGTTTATATTGGTCATGGAGGGAATCCCAATGTAAGAAATAATGCAGTGCCTCATGATCAAAAGTTGGAAGGAGGAAATCTTGCTTTGAAGAATAGTATGGATGCAAAGAGTCCTGTGAGGGTTATATTGAAGGTCTTCAGAAAATCAGGGAATAAAAACACTAACCATTTCTCATTTATATATGATGGATTATACTTAGTTGAGAAGATGACCCAGGAAAGAGGGAAATTTGGAAAACTGGTGTTCAAGTTTGTACTGAGTAGAATCTTAGAGCAACCCTCGACTTGTGTTACCCCCAAGGACGAGGTTATGGGGAGTGCCAATAATTCAGGGCAATGTGCTAATTTTTCTCTTAGGAAAAGGCTCAAATCTAAAGGTTGTGCAGCCAAAAGGGATATTGTCATCATGAATGATATTTCAGAGGGACAAGAAAAGTTTCCTATTCGGGTGGTGGCTTCAACTCATGTTGATCAGATGCCAAAATCCTTTAATTACATAGTCAATATCATTCATGCCGATCATTTCAAGTGGCCAATAGTATATGGCTGTGATTGTGTAGATGGATGTGTGGACTGTGAGAAATGTGCCTGCATTATTAAGAATGGTGGAAAAATTCCCTATGACAATAACAAAAGACTTGTTTCTGGATTGGGATCATCCCTCATGTATGAGTGCGGCCCTTCTTGCAAGTGCTCCTCATCTTGCATCAACCGAGTAAGTCCGCATGGCATTCAGTTCCAACTCGAAATCTTCAAAACTGAATCGAAGGGTTGGGGTGTTCGGACACGCTCTTTCATTCCCTCCGGAAGCTTTGTTTGTGAATACATTGGGGAAGTTCTTCACAATAGAGAAGCTGGATCAAGGCAAAATTTTGAAAACTATATGGTTAATATGGGTATTGGCAAGGTCTTCATTGATGCAACAAGACAAGGAAACATTGGAAGATTTATAAACCACGGTTGTTCTCCCAATCTCCATGTCAAAGATGTTTTGTATGATCATAATGATAAGAACCTTCCCCATAAAATGCTGTTTGCTGCAAGGGATATACCTGCTGGGAGAGAGCTGAGTTATGATTATAATTGCTGCAAGTCAAGAGTTATCTGCATTGGTGGTAATCTTTGCCGCTGTGGTTCACCTAAATGCATCGGACAAATCTATGTTTAA 1644 0.4082 MKASKSLGRMQEEWYTEPLSITSDGSSSSPASKKMDEFFVKRNKVNQALVIFRNMFVELLSEHEAGQIGHMKATHKALMEAAMLMQKKHLLVNSKKRVGHVPGIEVGNLFQYRNELYVVGLHRQFTSGIDYMWKGDYTLATSIVVTDRYANARESSGALVYIGHGGNPNVRNNAVPHDQKLEGGNLALKNSMDAKSPVRVILKVFRKSGNKNTNHFSFIYDGLYLVEKMTQERGKFGKLVFKFVLSRILEQPSTCVTPKDEVMGSANNSGQCANFSLRKRLKSKGCAAKRDIVIMNDISEGQEKFPIRVVASTHVDQMPKSFNYIVNIIHADHFKWPIVYGCDCVDGCVDCEKCACIIKNGGKIPYDNNKRLVSGLGSSLMYECGPSCKCSSSCINRVSPHGIQFQLEIFKTESKGWGVRTRSFIPSGSFVCEYIGEVLHNREAGSRQNFENYMVNMGIGKVFIDATRQGNIGRFINHGCSPNLHVKDVLYDHNDKNLPHKMLFAARDIPAGRELSYDYNCCKSRVICIGGNLCRCGSPKCIGQIYV* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1569 547 Gene3D - 80 270 IPR036987 -
Dod07g1569 547 SMART set_7 405 526 IPR001214 GO:0005515
Dod07g1569 547 Pfam Pre-SET motif 298 397 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod07g1569 547 Gene3D SET domain 271 529 IPR046341 -
Dod07g1569 547 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 23 543 - -
Dod07g1569 547 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 23 543 - -
Dod07g1569 547 SUPERFAMILY PUA domain-like 81 255 IPR015947 -
Dod07g1569 547 ProSiteProfiles SET domain profile. 405 520 IPR001214 GO:0005515
Dod07g1569 547 ProSiteProfiles YDG domain profile. 99 247 IPR003105 -
Dod07g1569 547 SMART G9a_1 94 251 IPR003105 -
Dod07g1569 547 SUPERFAMILY SET domain 288 526 IPR046341 -
Dod07g1569 547 SMART preset_2 295 389 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod07g1569 547 ProSiteProfiles Pre-SET domain profile. 340 402 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod07g1569 547 Pfam SAD/SRA domain 98 251 IPR003105 -
Dod07g1569 547 Pfam SET domain 416 520 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1569 Dod-Chr7 42604238 42606097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1569 67 545 Su(var)3-9 homologs AT1G73100 34.165 4.94e-82 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod07g1569 SAD_SRA 1.1e-40 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1569 - K11420 gmx:100807574 647.121