Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1542 ATGGAGGGTCATCGTCTCCATCATCATCATCAGCACCTTCAACCCCCTCTTCCTTCTCACAACATCATTACTAGTCATCATCATGTCAACGTGGAAGGCACTGATAGGTTCCCTCAGTGGAGCATCCAAGAGACCAAAGAGTTCCTTATGGTGCGAGCAGATCTTGATCAGACTTTCATGGAGACAAAGAGGAACAAGCAGTTGTGGCAAGTCATCTCCAACAACATGAAGGAAAAGGGTTACCAAAGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGCTACAAGGGATGTGAAACAGTGGAGCCTGAAGCCTTGAGACAGCAATTCCCGTTTTACAATGAGCTTCAAGCGATTTTCACTGGAAGGATGCAGAGAATGCTGTGGGCTGAAGCTGAAGGAAGTTCCAAGAAGAAGGGCATGCACATCTCATCTGAGGATGAAGAAGAAGGTAATGAAGAGAGTGAGGATCAAAAGGGTATCAAAAGAAAGAAGAAAAAGGCCAAGATAGTTGGCAGGGGTAGTGGTACTAGTCATGGTCACAACAACATGTTGAACAATTTGAAGGAGATTCTAGAAGAGTTCATGAGGCAACAGATGCAAATAGAAGCACAATGGATGGAGGCTTTTGAAGCAAGGGAGAATGAGAGGAGAATAAAGGAGATGGAGTGGAGGCAAGCCATGGAGGCCTTAGAGAATGAGAGGTTAATGATGGACCAGAGATGGAGAGAGAGGGAAGAACAAAGGAGGATTAGGGAAGAAGCTAGGGCTGAGAAGAGGGATGCTCTAATCACAGCTCTGTTGAACAAGCTAGGAAGTCAAGAGATGTAG 843 0.4579 MEGHRLHHHHQHLQPPLPSHNIITSHHHVNVEGTDRFPQWSIQETKEFLMVRADLDQTFMETKRNKQLWQVISNNMKEKGYQRSAEQCKCKWKNLVTRYKGCETVEPEALRQQFPFYNELQAIFTGRMQRMLWAEAEGSSKKKGMHISSEDEEEGNEESEDQKGIKRKKKKAKIVGRGSGTSHGHNNMLNNLKEILEEFMRQQMQIEAQWMEAFEARENERRIKEMEWRQAMEALENERLMMDQRWREREEQRRIREEARAEKRDALITALLNKLGSQEM* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1542 280 MobiDBLite consensus disorder prediction 138 187 - -
Dod07g1542 280 CDD GT1 38 103 - -
Dod07g1542 280 Pfam Myb/SANT-like DNA-binding domain 39 123 IPR044822 -
Dod07g1542 280 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 278 - -
Dod07g1542 280 ProSiteProfiles Myb-like domain profile. 40 96 IPR001005 -
Dod07g1542 280 Gene3D - 40 101 - -
Dod07g1542 280 Coils Coil 189 209 - -
Dod07g1542 280 MobiDBLite consensus disorder prediction 1 22 - -
Dod07g1542 280 PANTHER - 1 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1542 Dod-Chr7 41901085 41908805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1542 35 276 Trihelix Transcription Factor Family AT5G01380 53.759 1.45e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod07g1542 Myb_DNA-bind_4 3.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1542 - - gmx:100794230 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1542 07 41901085 41908805 Dod07g1542 07 41901085 41908805 ECH